RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Parp12Q8BZ20 711 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm13199Q8C8E0 125 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rps6kl1Q8R2S1 544 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gtf2a1lQ8R4I4 468 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rpa1Q8VEE4 623 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Asb18Q8VHA6 467 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Alg1Q921Q3 482 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pih1d1Q9CQJ2 290 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fam174aQ9D3L0 190 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 IL36RNQ9QYY1 156 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Magel2Q9QZ04 1284 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rnf25Q9QZR0 456 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Rfwd2Q9R1A8 733 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cyp2g1Q9WV19 494 aa6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Stau1Q9Z108 487 aaKnown RBP6.91□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gbp11A9YVJ5 442 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pdzd8B9EJ80 1147 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm20721E9Q2U8 318 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm7995L7N2E4 160 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Hoxa2P31245 372 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mapkapk2P49138 386 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CtswP56203 371 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pebp1P70296 187 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Prickle1Q3U5C7 832 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sult1d1Q3UZZ6 295 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Garnl3Q3V0G7 1038 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 FntaQ61239 377 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sema4bQ62179 823 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sp140Q6NSQ5 534 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Prmt8Q6PAK3 394 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AopepQ8BXQ6 817 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccdc28bQ8CEG5 200 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gpr153Q8K0Z9 631 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Arfip2Q8K221 341 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mta1Q8K4B0 715 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Adcy4Q91WF3 1077 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Msi2Q920Q6 346 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Aco2Q99KI0 780 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pex6Q99LC9 981 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ndc80Q9D0F1 642 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Cacng3Q9JJV5 315 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trip4Q9QXN3 581 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Apobec2Q9WV35 224 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Sptbn4E9PX29 2561 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm7792A0A0J9YU01 481 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fbxo47A2A6H3 451 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm3183D3YUJ6 481 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vmn1r39G3UWE6 305 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm3139J3QK78 481 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gm3106J3QPH3 481 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pde9aO70628 534 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 WapP01173 134 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 H2-Q7P14429 334 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 H2-Q9P14431 200 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Akr1b7P21300 316 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Epha3P29319 983 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Vps45P97390 570 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ankmy2Q3TPE9 440 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ppp1r13lQ5I1X5 824 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Trav8d-2Q5R1B6 112 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tdrd5Q5VCS6 1040 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gngt2Q61017 69 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Six4Q61321 775 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fastkd1Q6DI86 829 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 AmphQ7TQF7 686 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Mtmr12Q80TA6 747 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Pcdh19Q80TF3 1145 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Zbtb49Q8BXX2 756 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ccdc159Q8C963 411 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Il17cQ8K4C5 194 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Treml1Q8K558 317 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Coq6Q8R1S0 476 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Def8Q99J78 448 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gadd45gip1Q9CR59 222 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 CinpQ9D0V8 212 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 MispQ9D279 648 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Gpn3Q9D3W4 284 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Tsc1Q9EP53 1161 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Fut8Q9WTS2 575 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Slc23a1Q9Z2J0 605 aa6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Ascc3E9PZJ8 2198 aaKnown RBP6.9□□□□□ -1.3
Bdnf-201ENSMUST00000053317 Olfr566A0A1B0GST0 319 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sppl2cA2A6C4 690 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dhx35A2ACQ1 703 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ifi206G3UZV2 921 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Vmn2r39L7N2E5 861 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MntO08789 591 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mmp13P33435 472 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Igfbp2P47877 305 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Naf1Q3UMQ8 489 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lsmem1Q3UQS2 128 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pdp2Q504M2 532 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Spata48Q5NC83 441 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Elavl3Q60900 367 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nt5eQ61503 576 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sh3gl2Q62420 352 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sf1Q64213 653 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 NeproQ8R2U2 564 aa6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sh3kbp1Q8R550 709 aaKnown RBP6.9□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ubqln5Q9D4I8 510 aa6.9□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms