RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Ddx28Q9CWT6 540 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Pop5Q9DB28 169 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dcaf6Q9DC22 876 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dlc1Q9R0Z9 1092 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Alas2P08680 587 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Tcea1P10711 301 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Faf1P54731 649 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Lrrc3P59034 257 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Rab10P61027 200 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Rbm20Q3UQS8 1199 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Trcg1Q58Y74 825 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Lcp1Q61233 627 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Adamts2Q8C9W3 1213 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Lurap1lQ8K2P1 221 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Twf1Q91YR1 350 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Fam136aQ9CR98 138 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 AenQ9CZI9 336 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Plpp6Q9D4F2 292 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Spesp1Q9D5A0 399 aa13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 VapbQ9QY76 243 aaKnown RBP13.35□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Serpinb3cA2RSF9 386 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Gm8334F7CD45 553 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Ring1O35730 406 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 P01641 117 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Cyp2a4P15392 494 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Cyp2a5P20852 494 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Hoxd8P23463 289 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Tubgcp3P58854 905 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Pdcd1Q02242 288 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 DtlQ3TLR7 729 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Slc22a15Q504N2 544 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Tead4Q62296 427 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 CochQ62507 552 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Sel1l3Q80TS8 1137 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dyrk4Q8BI55 632 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Tgm6Q8BM11 706 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Clic5Q8BXK9 251 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Cog4Q8R1U1 785 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Ttc36Q8VBW8 186 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Plbd1Q8VCI0 550 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Mospd1Q8VEL0 213 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Marc2Q922Q1 338 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 EqtnQ9D9V2 337 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dpp6Q9Z218 804 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Vmn2r74E9PW21 853 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Olfr603L7N1Y4 312 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Prdx5P99029 210 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Eps8Q08509 821 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 CrtamQ149L7 389 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Chi3l1Q61362 389 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 SnupnQ80W37 358 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 PvrQ8K094 408 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Acap1Q8K2H4 740 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 TbccQ8VCN9 341 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 PxnQ8VI36 591 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Aco2Q99KI0 780 aaKnown RBP13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 DcpsQ9DAR7 338 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 PignQ9R1S3 931 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Igkv5-45A0A0B4J1J1 115 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Rpl9-ps6A0A140T8T4 192 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Olfr839-ps1A0A1D5RMH6 312 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Olfr292F8VQ84 308 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dpy19l2P0CW70 773 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Gjb3P28231 270 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Htr2cP34968 459 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Rpl9P51410 192 aaKnown RBP13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Dsc2P55292 902 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Lmf1Q3U3R4 574 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Macrod2Q3UYG8 475 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Smoc2Q8CD91 447 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Clip4Q8CI96 704 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Slc45a3Q8K0H7 553 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Vps39Q8R5L3 886 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Pcdha11Q91Y19 950 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Pdk3Q922H2 415 aaKnown RBP13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Cdkn2aipnlQ9D211 116 aaKnown RBP13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Bcas2Q9D287 225 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 S100pbpQ9D5K4 396 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Rnft1Q9DCN7 395 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Phc2Q9QWH1 850 aa13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 HnrnpfQ9Z2X1 415 aaKnown RBP13.34□□□□□ -0.27
Prpf38b-201ENSMUST00000029480 Gm5485A0A1D5RM98 91 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ralgps1A2AR50 585 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Klhl3E0CZ16 587 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Gm4788E9Q8B5 879 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Pik3r2O08908 722 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 JunbP09450 344 aaKnown RBP13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Spp1P10923 294 aaKnown RBP13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 GzmdP11033 252 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Ppp3cbP48453 525 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Mapkapk2P49138 386 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Lypla1P97823 230 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Smu1Q3UKJ7 513 aaKnown RBP13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Sema3cQ62181 751 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 N4bp1Q6A037 893 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Casc4Q6P2L7 435 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Thnsl1Q8BH55 747 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Kcns3Q8BQZ8 491 aa13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 AclyQ91V92 1091 aaKnown RBP13.33□□□□□ -0.28
Prpf38b-201ENSMUST00000029480 Pcdhb13Q91Y06 796 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms