RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Acsf2Q8VCW8 615 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Lgals12Q91VD1 314 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Tmco1Q921L3 188 aaKnown RBP18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Trmt11Q9CWH5 460 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Armc1Q9D7A8 282 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Cacna1cQ01815 2139 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gbp6A0A0G2JDV3 611 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Spata31E9QAF0 1014 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Il4i1O09046 630 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Msr1P30204 458 aaKnown RBP18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Prox1P48437 737 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Usp46P62069 366 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Trappc9Q3U0M1 1148 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Snx32Q80ZJ7 404 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ctxn3Q8BXZ0 80 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Tmem252Q8C353 183 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Rab36Q8CAM5 267 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Hmgcll1Q8JZS7 343 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Hacd3Q8K2C9 362 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Q922M7 232 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Glod4Q9CPV4 298 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ppp6cQ9CQR6 305 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Jam2Q9JI59 298 aa18.74■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Cyp4a12bA2A974 508 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm12800B1AUV4 484 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Olfr620E9PZ66 313 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Vmn2r65G3X931 845 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm12794L7MTS5 483 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Socs2O35717 198 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slc6a20bO88575 635 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 P01664 111 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Pou4f1P17208 421 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Hcrtr1P58307 416 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Spryd7Q3TFQ1 196 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Trmt10cQ3UFY8 414 aaKnown RBP18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slc22a15Q504N2 544 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slc6a3Q61327 619 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 MogQ61885 246 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Six3Q62233 333 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 SvoplQ6PDF3 494 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Mpp7Q8BVD5 576 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 HscbQ8K3A0 234 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 BfarQ8R079 450 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slc6a20aQ8VDB9 592 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Cyp4a12aQ91WL5 508 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gemin2Q9CQQ4 269 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Pbld2Q9CXN7 288 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Fam227aQ9D3V8 625 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Spag4Q9JJF2 443 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Aqp5Q9WTY4 265 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Rnf19bA2A7Q9 732 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ttll9A2APC3 461 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Fpr-rs4A4FUQ5 323 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slfn9B1ARD6 910 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Olfr743L7N1Y2 311 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Vmn2r61L7N2B8 865 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Rgs2O08849 211 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 PargO88622 969 aaKnown RBP18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 GhrP16882 650 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Tgm2P21981 686 aaKnown RBP18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 GaaP70699 953 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Zyg11bQ3UFS0 744 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Rab26Q504M8 260 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Jak2Q62120 1129 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Nqo1Q64669 274 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Nrg1Q6DR99 700 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Mab21L3Q8CI17 429 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Itfg1Q99KW9 610 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Tspan11Q9D1D1 253 aa18.73■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 1700001O22RikA2APZ1 375 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 SmoktcrA2KF29 484 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm3252E9PUT9 216 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm3468E9QAJ8 216 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Acvr1P37172 509 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Defa8P50706 81 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Pip5k1bP70181 539 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Lrig1P70193 1091 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Slfn4Q3UV66 602 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Cyp2d40Q6P8N9 338 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Dennd2cQ6P9P8 914 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Arhgap26Q6ZQ82 814 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Dnajc15Q78YY6 149 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Mtrf1lQ8BJU9 373 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Lrrc66Q8K0B3 872 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 OptcQ920A0 328 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Nudt7Q99P30 236 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ndufaf4Q9D1H6 173 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Kif12Q9D2Z8 642 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Trhr2Q9ERT2 382 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Actl7aQ9QY84 440 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 DgkeQ9R1C6 564 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 UtrnE9Q6R7 3430 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Alpk2Q91ZB0 2144 aa18.72■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm3147A0A0J9YU88 481 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm10424A0A0J9YVD0 481 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Arhgap36B1AUC7 590 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Tmem233D3Z1U7 110 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ccdc62E9PVD1 701 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 F830016B08RikG3UWE2 416 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Gm7971J3QMM8 481 aa18.71■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms