RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 POM121L1PQ3SYA9 428 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ODF2Q5BJF6 829 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF569Q5MCW4 686 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 FAM182AQ5T1J6 154 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 KAZNQ674X7 775 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 C22orf39Q6P5X5 142 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 B4GALNT4Q76KP1 1039 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 B3GNT8Q7Z7M8 397 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 PRPF39Q86UA1 669 aaKnown RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RCOR2Q8IZ40 523 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SH2D3CQ8N5H7 860 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 UBL4BQ8N7F7 174 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ZNF548Q8NEK5 533 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 ARRDC3Q96B67 414 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 HAUS1Q96CS2 278 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 LIN37Q96GY3 246 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 OLFM3Q96PB7 478 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 WDR24Q96S15 920 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 FAM118BQ9BPY3 351 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 BOCQ9BWV1 1114 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 OSBPL8Q9BZF1 889 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 EPN3Q9H201 632 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RETREG1Q9H6L5 497 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 USP29Q9HBJ7 922 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 FZD3Q9NPG1 666 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 KCND1Q9NSA2 647 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 DTLQ9NZJ0 730 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SAE1Q9UBE0 346 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SLC25A13Q9UJS0 675 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 HS3ST2Q9Y278 367 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 MAN2B2Q9Y2E5 1009 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 FCF1Q9Y324 198 aaKnown RBP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.47□□□□□ -1.21
PHGDH-225ENST00000641720 PCDHGA7Q9Y5G6 932 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 HEY1Q9Y5J3 304 aa7.47□□□□□ -1.21
PHGDH-225ENST00000641720 HIVEP1P15822 2718 aa7.46□□□□□ -1.21
PHGDH-225ENST00000641720 TBC1D3DA0A087WVF3 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3IA0A087WXS9 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3EA0A087X179 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3KA0A087X1G2 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 GOLGA6L9A6NEM1 432 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3FA6NER0 549 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 POM121BA6NF01 834 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ARHGAP42A6NI28 874 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3LB9A6J9 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 APOL1O14791 398 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 RAD51BO15315 384 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 KDELR3O43731 214 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 KIF5CO60282 957 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 CST8O60676 142 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 MAGEC1O60732 1142 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF821O75541 412 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TCEA3O75764 348 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TMCC1O94876 653 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3HP0C7X1 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SERPINB6P35237 376 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 GARSP41250 739 aaKnown RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 CLDN2P57739 230 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 FOXK1P85037 733 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SULT2A1Q06520 285 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 KLF1Q13351 362 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBR1Q16650 682 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 CDKN3Q16667 212 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SETMARQ53H47 684 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SLC45A4Q5BKX6 768 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3GQ6DHY5 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 HIST2H2BCQ6DN03 193 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3CQ6IPX1 549 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 RETSATQ6NUM9 610 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ZCCHC8Q6NZY4 707 aaKnown RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 Q6ZVU0 165 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 BBS12Q6ZW61 710 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF354CQ86Y25 554 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SLC35F3Q8IY50 421 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TBC1D3Q8IZP1 549 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ATPAF2Q8N5M1 289 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 LZTR1Q8N653 840 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 MAPK15Q8TD08 544 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 GANCQ8TET4 914 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SGF29Q96ES7 293 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 MYOCQ99972 504 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TNKS2Q9H2K2 1166 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 TCEAL2Q9H3H9 227 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 PREBQ9HCU5 417 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 SMARCAL1Q9NZC9 954 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 LHX3Q9UBR4 397 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 UBA2Q9UBT2 640 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 IPO11Q9UI26 975 aaKnown RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 R3HDM2Q9Y2K5 976 aaKnown RBP7.46□□□□□ -1.22
PHGDH-225ENST00000641720 ZKSCAN5Q9Y2L8 839 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 MED13LQ71F56 2210 aa7.46□□□□□ -1.22
PHGDH-225ENST00000641720 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms