RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ATP13A1Q9HD20 1204 aa10.32□□□□□ -0.76
PHGDH-224ENST00000641711 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
PHGDH-224ENST00000641711 DCDC2Q9UHG0 476 aa10.32□□□□□ -0.76
PHGDH-224ENST00000641711 SHROOM3Q8TF72 1996 aa10.32□□□□□ -0.76
PHGDH-224ENST00000641711 WDR91A4D1P6 747 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 FAM86C2PA6NEL3 165 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ATP9BO43861 1147 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 GLRA3O75311 464 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 USP12O75317 370 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ZMPSTE24O75844 475 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 RASSF9O75901 435 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 KLF8O95600 359 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PEX11BO96011 259 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ALDOAP04075 364 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 BPGMP07738 259 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ERVK-10P10266 1014 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 MZF1P28698 734 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TIE1P35590 1138 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 HADHAP40939 763 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PAPOLAP51003 745 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 MTAPQ13126 283 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 HNRNPDQ14103 355 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 GAS6Q14393 721 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ZNF234Q14588 700 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 RFTN1Q14699 578 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 SETDB1Q15047 1291 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 CRY1Q16526 586 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PTPRNQ16849 979 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 FNDC3BQ53EP0 1204 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PCID2Q5JVF3 399 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 CERCAMQ5T4B2 595 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TEDDM1Q5T9Z0 273 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ATG16L1Q676U5 607 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PKN3Q6P5Z2 889 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 SERPINA13PQ6UXR4 307 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 Q6ZS52 159 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 C1orf210Q8IVY1 113 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PLPP6Q8IY26 295 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 NDUFAF2Q8N183 169 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TEX26Q8N6G2 289 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ISG20Q96AZ6 181 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ZNF419Q96HQ0 510 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 C7orf26Q96N11 449 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 RBBP8Q99708 897 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TBL1YQ9BQ87 522 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 MCMBPQ9BTE3 642 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TSSK1BQ9BXA7 367 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TMEM245Q9H330 911 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 C12orf65Q9H3J6 166 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 POLMQ9NP87 494 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 PCMTD2Q9NV79 361 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 SPATA6Q9NWH7 488 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 NSMCE4AQ9NXX6 385 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ZFATQ9P243 1243 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 TXNDC16Q9P2K2 825 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 IPO11Q9UI26 975 aaKnown RBP10.31□□□□□ -0.76
PHGDH-224ENST00000641711 VPS51Q9UID3 782 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 ERVW-1Q9UQF0 538 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 STON1Q9Y6Q2 735 aa10.31□□□□□ -0.76
PHGDH-224ENST00000641711 EDDM13A0A1B0GTR0 161 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 H0YHG0 523 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 TPP1O14773 563 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 PI15O43692 258 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 KDELR3O43731 214 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 ATP5HO75947 161 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 APBB3O95704 486 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 HLA-DQB2P05538 268 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 HOXB2P14652 356 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 BGNP21810 368 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 SPRP35270 261 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 IL12RB1P42701 662 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 SERPINH1P50454 418 aaKnown RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 RENBPP51606 427 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 LIMK2P53671 638 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 SEC13P55735 322 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 NCALDP61601 193 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 SF3A3Q12874 501 aaKnown RBP eCLIP10.3□□□□□ -0.761e-9■■■■□ 22.2
PHGDH-224ENST00000641711 MPP3Q13368 585 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 OLIG2Q13516 323 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 SERINC3Q13530 473 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 PDE1CQ14123 709 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 HNRNPA1L2Q32P51 320 aaKnown RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 TTC31Q49AM3 519 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 INO80DQ53TQ3 878 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 C2orf27AQ580R0 203 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 DENND5AQ6IQ26 1287 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 RANBP10Q6VN20 620 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 CNTN4Q8IWV2 1026 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 APCDD1Q8J025 514 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 PCDH20Q8N6Y1 951 aaKnown RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 TXNDC5Q8NBS9 432 aaKnown RBP10.3□□□□□ -0.76
PHGDH-224ENST00000641711 OR7D4Q8NG98 312 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 OR52K2Q8NGK3 314 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 MYO19Q96H55 970 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 MRGPRX3Q96LB0 322 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 ZNF599Q96NL3 588 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
PHGDH-224ENST00000641711 TRIM55Q9BYV6 548 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms