RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ZWILCHQ9H900 591 aa10.1□□□□□ -0.79
PHGDH-222ENST00000641587 RRN3Q9NYV6 651 aa10.1□□□□□ -0.79
PHGDH-222ENST00000641587 PCSK1NQ9UHG2 260 aa10.1□□□□□ -0.79
PHGDH-222ENST00000641587 DOLKQ9UPQ8 538 aa10.1□□□□□ -0.79
PHGDH-222ENST00000641587 NEU3Q9UQ49 428 aa10.1□□□□□ -0.79
PHGDH-222ENST00000641587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.1□□□□□ -0.79
PHGDH-222ENST00000641587 PRAMEF33A0A0G2JMD5 474 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 MIF4GDA9UHW6 222 aaKnown RBP10.09□□□□□ -0.79
PHGDH-222ENST00000641587 FAM72CH0Y354 149 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PRPSAP2O60256 369 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PRAMEF10O60809 474 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 LRCH4O75427 683 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TM7SF2O76062 418 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 KRT1P04264 644 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
PHGDH-222ENST00000641587 MLLT3P42568 568 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-222ENST00000641587 INHBCP55103 352 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TAS2R40P59535 323 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 SRSF1Q07955 248 aaKnown RBP eCLIP10.09□□□□□ -0.792e-10■■■□□ 18.2
PHGDH-222ENST00000641587 SLC20A2Q08357 652 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PTK2BQ14289 1009 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 MEI1Q5TIA1 1274 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 FAM72AQ5TYM5 149 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 MANEALQ5VSG8 457 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 FAM72DQ6L9T8 149 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 STRADAQ7RTN6 431 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 RD3Q7Z3Z2 195 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TMPRSS9Q7Z410 1059 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 SLFN11Q7Z7L1 901 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TTC7BQ86TV6 843 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 NLRP14Q86W24 1093 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 FAM72BQ86X60 149 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 RHOT1Q8IXI2 618 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 WDR48Q8TAF3 677 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 HTR3CQ8WXA8 447 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 RAB7BQ96AH8 199 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 ISG20Q96AZ6 181 aaKnown RBP10.09□□□□□ -0.79
PHGDH-222ENST00000641587 SGF29Q96ES7 293 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PDXPQ96GD0 296 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TBATAQ96M53 351 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 ARHGAP9Q9BRR9 750 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 STARD5Q9NSY2 213 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 FOXJ2Q9P0K8 574 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 LOXL2Q9Y4K0 774 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PCDHGA7Q9Y5G6 932 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
PHGDH-222ENST00000641587 TLN1Q9Y490 2541 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 ZFC3H1O60293 1989 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 CCDC66A2RUB6 948 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 INSIG1O15503 277 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 PSTPIP1O43586 416 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 URI1O94763 535 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 TMCC1O94876 653 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 PIGNO95427 931 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 GSRP00390 522 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 F9P00740 461 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 JMJD7P0C870 316 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 LIPCP11150 499 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 TCF4P15884 667 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 CTNNA2P26232 953 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 MIPP30301 263 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 CTNNA1P35221 906 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 PCK1P35558 622 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 MARCKSL1P49006 195 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 HK3P52790 923 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 HDAC4P56524 1084 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 SNRPD1P62314 119 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 YPEL5P62699 121 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 SMTNL2Q2TAL5 461 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 WSCD2Q2TBF2 565 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 MYLK3Q32MK0 819 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 RWDD4Q6NW29 188 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 ENPP7Q6UWV6 458 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 GDPD4Q6W3E5 623 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 ZFAND4Q86XD8 727 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 CCDC50Q8IVM0 306 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 Q8N9G6 341 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 CXorf40AQ8TE69 158 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 JPH3Q8WXH2 748 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 HSPH1Q92598 858 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 KRT35Q92764 455 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 EXOC2Q96KP1 924 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 TLR10Q9BXR5 811 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 KLC2Q9H0B6 622 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 LRRN3Q9H3W5 708 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 PPARGC1AQ9UBK2 798 aaKnown RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 GPR34Q9UPC5 381 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 SDK2Q58EX2 2172 aa10.08□□□□□ -0.8
PHGDH-222ENST00000641587 UBR5O95071 2799 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-222ENST00000641587 ARHGEF17Q96PE2 2063 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-222ENST00000641587 NBPF19A0A087WUL8 3843 aa10.07□□□□□ -0.8
PHGDH-222ENST00000641587 RIOK3O14730 519 aaKnown RBP10.07□□□□□ -0.8
PHGDH-222ENST00000641587 FANCGO15287 622 aa10.07□□□□□ -0.8
PHGDH-222ENST00000641587 DDX3YO15523 660 aaKnown RBP10.07□□□□□ -0.8
PHGDH-222ENST00000641587 SUV39H1O43463 412 aa10.07□□□□□ -0.8
PHGDH-222ENST00000641587 LRIG2O94898 1065 aa10.07□□□□□ -0.8
PHGDH-222ENST00000641587 POP4O95707 220 aaKnown RBP10.07□□□□□ -0.8
PHGDH-222ENST00000641587 PRKCGP05129 697 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms