RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MROH9Q5TGP6 573 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 Q6ZVU0 165 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 CNTN4Q8IWV2 1026 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 PLPP6Q8IY26 295 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 OR13J1Q8NGT2 312 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 PIH1D2Q8WWB5 315 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 FGF14Q92915 247 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 PEX13Q92968 403 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 FAM167BQ9BTA0 163 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 SPATA6Q9NWH7 488 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
PHGDH-221ENST00000641573 RPL26L1Q9UNX3 145 aaKnown RBP13.14□□□□□ -0.31
PHGDH-221ENST00000641573 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 TTC34A8MYJ7 566 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 GOLGA8RI6L899 631 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 AURKAO14965 403 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PRPF4O43172 522 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 SLC7A4O43246 635 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 BUD23O43709 281 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 RPP40O75818 363 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ITGA2BP08514 1039 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 F7P08709 466 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 CTPS1P17812 591 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 GJA4P35212 333 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 SPRP35270 261 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 RECQLP46063 649 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ARSDP51689 593 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 GNGT1P63211 74 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 TMPRSS15P98073 1019 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 RAD51Q06609 339 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 DNAJC3Q13217 504 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 MPP2Q14168 576 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PTPRCAPQ14761 206 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PTPRNQ16849 979 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 NEPROQ6NW34 567 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 DPY19L3Q6ZPD9 716 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 MICALCLQ6ZW33 695 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 MTSS1LQ765P7 747 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 GLT6D1Q7Z4J2 308 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 CNPY4Q8N129 248 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 OR13C4Q8NGS5 318 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 FRS2Q8WU20 508 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PTPRN2Q92932 1015 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 HDAC10Q969S8 669 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 DNAJC1Q96KC8 554 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 RBBP8Q99708 897 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 RPP25Q9BUL9 199 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 TRMT61BQ9BVS5 477 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 ELOVL2Q9NXB9 296 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 HACD3Q9P035 362 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
PHGDH-221ENST00000641573 SLC8A2Q9UPR5 921 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
PHGDH-221ENST00000641573 FAM47DPA6NHR8 397 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 C2orf81A6NN90 581 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 A6NNZ2 444 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 WASH3PC4AMC7 463 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 CCL22O00626 93 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 TIMM44O43615 452 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 TYROBPO43914 113 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 RFPL1O75677 317 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 PYGBP11216 843 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 LPOP22079 712 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 OPRD1P41143 372 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 ZNF140P52738 457 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 LIMK2P53671 638 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 PRAMEP78395 509 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 MPP1Q00013 466 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 MESP2Q0VG99 397 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 CTBP1Q13363 440 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 GRM3Q14832 879 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 PTPRRQ15256 657 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 TUBB8Q3ZCM7 444 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 DENND6AQ8IWF6 608 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms