RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 WASF2Q9Y6W5 498 aa11.62□□□□□ -0.55
MECP2-226ENST00000640414 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
MECP2-226ENST00000640414 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 KCNU1A8MYU2 1149 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 KIF2AO00139 706 aaPredicted RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 NKX2-8O15522 239 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 SNAP91O60641 907 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 LEFTY1O75610 366 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 ENDOD1O94919 500 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 PRKCGP05129 697 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 TCF4P15884 667 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 CASQ1P31415 396 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 MAN1A1P33908 653 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 UGT1A3P35503 534 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 TAS2R40P59535 323 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 PPARDQ03181 441 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 RABGAP1LQ5R372 815 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 PHF19Q5T6S3 580 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 OTUD1Q5VV17 481 aaPredicted RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 FBXL22Q6P050 247 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 LVRNQ6Q4G3 990 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 BNIPLQ7Z465 357 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 FSTL5Q8N475 847 aaPredicted RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 DENND6BQ8NEG7 585 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 GPBAR1Q8TDU6 330 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 FAM172AQ8WUF8 416 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 SCG3Q8WXD2 468 aaKnown RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 CENPTQ96BT3 561 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 PSMB7Q99436 277 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 CDH19Q9H159 772 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 SEMA6CQ9H3T2 930 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 LCMT1Q9UIC8 334 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 PACSIN2Q9UNF0 486 aaPredicted RBP11.61□□□□□ -0.55
MECP2-226ENST00000640414 GPR34Q9UPC5 381 aa11.61□□□□□ -0.55
MECP2-226ENST00000640414 UNC13CQ8NB66 2214 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 LRBAP50851 2863 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 M0QYT0 321 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 AP1G1O43747 822 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 SPOPO43791 374 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 DUX1O43812 170 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 VPS4BO75351 444 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 LRCH4O75427 683 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 TRUB2O95900 331 aaKnown RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 ATP1A1P05023 1023 aaKnown RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 NR1D1P20393 614 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 MIPP30301 263 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 L1CAMP32004 1257 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 PCK1P35558 622 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 IGFALSP35858 605 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 SSR1P43307 286 aaKnown RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 RECQLP46063 649 aaPredicted RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 PEX5P50542 639 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 HDAC4P56524 1084 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 ELOCQ15369 112 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 RPS6KA1Q15418 735 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 CDO1Q16878 200 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 TXNRD3NBQ6F5E7 133 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 MACC1Q6ZN28 852 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 DPY19L3Q6ZPD9 716 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 OR6C4Q8NGE1 309 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 KRT35Q92764 455 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 HES6Q96HZ4 224 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 TRIM62Q9BVG3 475 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 ZNF768Q9H5H4 540 aaKnown RBP11.6□□□□□ -0.55
MECP2-226ENST00000640414 RRN3Q9NYV6 651 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 PCSK1NQ9UHG2 260 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 VPS51Q9UID3 782 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 APPL1Q9UKG1 709 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 STAP1Q9ULZ2 295 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 VPS4AQ9UN37 437 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 TP53TG5Q9Y2B4 290 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 PCDHA3Q9Y5H8 950 aa11.6□□□□□ -0.55
MECP2-226ENST00000640414 SYNJ2BP-COX16A0A087WUM0 186 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 K7EM74 188 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
MECP2-226ENST00000640414 TSPAN6O43657 245 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 ZNF821O75541 412 aaPredicted RBP11.59□□□□□ -0.55
MECP2-226ENST00000640414 RNF8O76064 485 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 IGLV3-25P01717 112 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 ALPIP09923 528 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 PRKAR1AP10644 381 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 IL1R2P27930 398 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 MARCKSL1P49006 195 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 SULT1E1P49888 294 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 DNA2P51530 1060 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 HK3P52790 923 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 YPEL5P62699 121 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 NME3Q13232 169 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 EIF4EBP2Q13542 120 aaPredicted RBP11.59□□□□□ -0.55
MECP2-226ENST00000640414 ATP13A4Q4VNC1 1196 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 EFHC2Q5JST6 749 aa11.59□□□□□ -0.55
MECP2-226ENST00000640414 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
MECP2-226ENST00000640414 SCYL2Q6P3W7 929 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms