RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 MOSPD3O75425 235 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PIAS1O75925 651 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 LSM8O95777 96 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 CALB1P05937 261 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 FYNP06241 537 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 HNRNPA1P09651 372 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATM-229ENST00000639953 P4HA1P13674 534 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CEBPBP17676 345 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PTPN2P17706 415 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PSMA2P25787 234 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ADORA2BP29275 332 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 HOXA9P31269 272 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 GJA4P35212 333 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 RPL22P35268 128 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 SLC1A1P43005 524 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ALDH1A3P47895 512 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 DYNLT1P63172 113 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 GABREP78334 506 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SLC10A2Q12908 348 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 PLD1Q13393 1074 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 MTM1Q13496 603 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ZNF268Q14587 947 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 EIF4HQ15056 248 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 CCNG2Q16589 344 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 KYNUQ16719 465 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PABPC1LQ4VXU2 614 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 CCDC38Q502W7 563 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CRB2Q5IJ48 1285 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 FNBP1LQ5T0N5 605 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 TRIM68Q6AZZ1 485 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 OR6B2Q6IFH4 312 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 HIBCHQ6NVY1 386 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 LRIG3Q6UXM1 1119 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 USP30Q70CQ3 517 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CXXC5Q7LFL8 322 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 GPRIN1Q7Z2K8 1008 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 TMC8Q8IU68 726 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SPATA2LQ8IUW3 424 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 FMNL3Q8IVF7 1028 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 C1orf210Q8IVY1 113 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CCDC105Q8IYK2 499 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 RCOR2Q8IZ40 523 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PYROXD2Q8N2H3 581 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CISD2Q8N5K1 135 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 NIPA2Q8N8Q9 360 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 B3GALNT2Q8NCR0 500 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ZMIZ2Q8NF64 920 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SPPL2BQ8TCT7 592 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 RSAD2Q8WXG1 361 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SLCO2A1Q92959 643 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PCED1BQ96HM7 432 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ATP6V1G3Q96LB4 118 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 FAM81BQ96LP2 452 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 CFAP57Q96MR6 1250 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 NECTIN4Q96NY8 510 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 MED10Q9BTT4 135 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 BTBD2Q9BX70 525 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ZNF518BQ9C0D4 1074 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 MIS12Q9H081 205 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 CDC42EP4Q9H3Q1 356 aaKnown RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 SMOC2Q9H3U7 446 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 PLAC1Q9HBJ0 212 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 MED4Q9NPJ6 270 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ETNK2Q9NVF9 386 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SLC12A6Q9UHW9 1150 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 MAGED2Q9UNF1 606 aaPredicted RBP6.19□□□□□ -1.42
ATM-229ENST00000639953 SNX10Q9Y5X0 201 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 SLC30A1Q9Y6M5 507 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 DOCK8Q8NF50 2099 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 DENND4CQ5VZ89 1909 aa6.19□□□□□ -1.42
ATM-229ENST00000639953 ZNF638Q14966 1978 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 PATJQ8NI35 1801 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 MYO16Q9Y6X6 1858 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 LRRD1A4D1F6 860 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 GOLGA6CA6NDK9 693 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 SMIM23A6NLE4 172 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 SLC38A8A6NNN8 435 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 GOLGA8KD6RF30 607 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 GSTA4O15217 222 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 NARSO43776 548 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 C1SP09871 688 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 FAM163BP0C2L3 166 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 GOLGA6DP0CG33 693 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 KRT3P12035 628 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 SLCO1A2P46721 670 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 RPL34P49207 117 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 FNTAP49354 379 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 TUFMP49411 452 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 HDAC4P56524 1084 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 GSCP56915 257 aaPredicted RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 GPX6P59796 221 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 MAGOHP61326 146 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 GNGT1P63211 74 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 OTUD4Q01804 1114 aaKnown RBP6.18□□□□□ -1.42
ATM-229ENST00000639953 SMARCB1Q12824 385 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 SF3A3Q12874 501 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATM-229ENST00000639953 NFYCQ13952 458 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 SYCP2LQ5T4T6 812 aa6.18□□□□□ -1.42
ATM-229ENST00000639953 STXBP5Q5T5C0 1151 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms