RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FAM174AQ8TBP5 190 aa21.8■■□□□ 1.08
SCN1B-206ENST00000638536 TCEAL2Q9H3H9 227 aaPredicted RBP21.8■■□□□ 1.08
SCN1B-206ENST00000638536 UCKL1Q9NWZ5 548 aa21.8■■□□□ 1.08
SCN1B-206ENST00000638536 TRMT1Q9NXH9 659 aaKnown RBP21.8■■□□□ 1.08
SCN1B-206ENST00000638536 CD84Q9UIB8 345 aa21.8■■□□□ 1.08
SCN1B-206ENST00000638536 DNPEPQ9ULA0 475 aa21.8■■□□□ 1.08
SCN1B-206ENST00000638536 SPAARA0A1B0GVQ0 90 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 MED19A0JLT2 244 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 ARRB1P49407 418 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 RPL26P61254 145 aaKnown RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 CDK18Q07002 472 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 ARHGEF7Q14155 803 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 CDKL3Q8IVW4 592 aaPredicted RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 CCDC110Q8TBZ0 833 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 ANP32BQ92688 251 aaKnown RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 EID2BQ96D98 161 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 DTD2Q96FN9 168 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 MRGPRX2Q96LB1 330 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 FCRL5Q96RD9 977 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 VAT1Q99536 393 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 APOOQ9BUR5 198 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 RPL26L1Q9UNX3 145 aaKnown RBP21.79■■□□□ 1.08
SCN1B-206ENST00000638536 ASPMQ8IZT6 3477 aa21.79■■□□□ 1.08
SCN1B-206ENST00000638536 CEACAM1P13688 526 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 CA4P22748 312 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 GDF10P55107 478 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 ANKRD20A2Q5SQ80 823 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 SEL1L2Q5TEA6 688 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 ANKRD20A1Q5TYW2 823 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 ANKRD20A3Q5VUR7 823 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 SLC13A5Q86YT5 568 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-206ENST00000638536 DCP2Q8IU60 420 aaKnown RBP21.78■■□□□ 1.08
SCN1B-206ENST00000638536 SLC25A45Q8N413 288 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 SLC35B2Q8TB61 432 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 BAHD1Q8TBE0 780 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-206ENST00000638536 RHBDD1Q8TEB9 315 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 NUS1Q96E22 293 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 LYSMD1Q96S90 227 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 MLPHQ9BV36 600 aaPredicted RBP21.78■■□□□ 1.08
SCN1B-206ENST00000638536 LGR4Q9BXB1 951 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 DNAJC28Q9NX36 388 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 FAM153AQ9UHL3 310 aa21.78■■□□□ 1.08
SCN1B-206ENST00000638536 BPTFQ12830 3046 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 GOLGA6L9A6NEM1 432 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 ENC1O14682 589 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 CXCR5P32302 372 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 CHRNA4P43681 627 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 WNT3AP56704 352 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 YPEL5P62699 121 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 OLIG2Q13516 323 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 SLC14A2Q15849 920 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 N4BP2L1Q5TBK1 243 aaPredicted RBP21.77■■□□□ 1.08
SCN1B-206ENST00000638536 RBFAQ8N0V3 343 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 NDUFAF2Q8N183 169 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 SCAMP4Q969E2 229 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 CARD9Q9H257 536 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 RSPH14Q9UHP6 348 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 TRHDEQ9UKU6 1024 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 WDFY3Q8IZQ1 3526 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 SCN8AQ9UQD0 1980 aa21.77■■□□□ 1.08
SCN1B-206ENST00000638536 USP27XA6NNY8 438 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 PSMD11O00231 422 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 FLRT2O43155 660 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 ITGAVP06756 1048 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 DGKAP23743 735 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 STC1P52823 247 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 THOP1P52888 689 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 MTM1Q13496 603 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 SUZ12Q15022 739 aaKnown RBP21.77■■□□□ 1.07
SCN1B-206ENST00000638536 ESRP1Q6NXG1 681 aaKnown RBP21.77■■□□□ 1.07
SCN1B-206ENST00000638536 PNCKQ6P2M8 343 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 PARGQ86W56 976 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 OXR1Q8N573 874 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 FAM71DQ8N9W8 422 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 TTC13Q8NBP0 860 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 TMEM121Q9BTD3 319 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 ADGRE3Q9BY15 652 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 ABCG8Q9H221 673 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 GBA3Q9H227 469 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 SLC32A1Q9H598 525 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 SHOC2Q9UQ13 582 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 SPO11Q9Y5K1 396 aa21.77■■□□□ 1.07
SCN1B-206ENST00000638536 C1orf232A0A0U1RR37 186 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 LOC285095A0A1B0GVY8 99 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 PIAS2O75928 621 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 CSF2P04141 144 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 ATXN1LP0C7T5 689 aaKnown RBP21.76■■□□□ 1.07
SCN1B-206ENST00000638536 GIMD1P0DJR0 217 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 NFKBIAP25963 317 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 PSMB4P28070 264 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 TRIM23P36406 574 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 SIX1Q15475 284 aaPredicted RBP21.76■■□□□ 1.07
SCN1B-206ENST00000638536 TRIP6Q15654 476 aaKnown RBP21.76■■□□□ 1.07
SCN1B-206ENST00000638536 LYSMD3Q7Z3D4 306 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 EID2Q8N6I1 236 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 C1orf54Q8WWF1 131 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 IFT43Q96FT9 208 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 WDR24Q96S15 920 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 AGAP2Q99490 1192 aa21.76■■□□□ 1.07
SCN1B-206ENST00000638536 PYCARDQ9ULZ3 195 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms