RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 SNRNP25Q9BV90 132 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CINPQ9BW66 212 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 TEX101Q9BY14 249 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 FRMD8Q9BZ67 464 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 DHX35Q9H5Z1 703 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 SEPT11Q9NVA2 429 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 ST14Q9Y5Y6 855 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 LRP4O75096 1905 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TTC24A2A3L6 582 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 EIF3CLB5ME19 914 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PDE2AO00408 941 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 EEF2KO00418 725 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TEX33O43247 280 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 HTRA2O43464 458 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PEX11BO96011 259 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TPM2P07951 284 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 MYCLP1P12525 358 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 CD1CP29017 333 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 SCNN1BP51168 640 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 IL10RBQ08334 325 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 SLC10A7Q0GE19 358 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 ACOX1Q15067 660 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 CNGA3Q16281 694 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 AMZ1Q400G9 498 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 ERMARDQ5T6L9 678 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PIM3Q86V86 326 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 ZDHHC1Q8WTX9 485 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PMEPA1Q969W9 287 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 NUS1Q96E22 293 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 EIF3CQ99613 913 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TRIM7Q9C029 511 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 CARS2Q9HA77 564 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 SP110Q9HB58 689 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 TAAR2Q9P1P5 351 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PCSK1NQ9UHG2 260 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 MOSPD1Q9UJG1 213 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PCDHGA3Q9Y5H0 932 aa12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 SPENQ96T58 3664 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-250ENST00000637809 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 DFFAO00273 331 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 ECEL1O95672 775 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 SFTPCP11686 197 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 CR2P20023 1033 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 LHCGRP22888 699 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PSMA2P25787 234 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 AK4P27144 223 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 DPYSQ14117 519 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 CLPPQ16740 277 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PLEKHA7Q6IQ23 1121 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 HSD11B1LQ7Z5J1 315 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PGBD5Q8N414 524 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 RCBTB1Q8NDN9 531 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 DTD2Q96FN9 168 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 CCDC74BQ96LY2 380 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PCMTD1Q96MG8 357 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 ERGIC2Q96RQ1 377 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 SLC12A9Q9BXP2 914 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 GSDMCQ9BYG8 508 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PARVAQ9NVD7 372 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 TRNAU1APQ9NX07 287 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 CHMP5Q9NZZ3 219 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 SUFUQ9UMX1 484 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 SLC17A4Q9Y2C5 497 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 PCDHGC4Q9Y5F7 938 aa12.13□□□□□ -0.47
CACNA1A-250ENST00000637809 LRRK1Q38SD2 2015 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 TMEM191CA6NGB0 347 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 STMND1H3BQB6 276 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 PPM1DO15297 605 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 DAPK3O43293 454 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 SOCS5O75159 536 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 TEAD1P28347 426 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ALDH4A1P30038 563 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 MIPP30301 263 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 VIPR1P32241 457 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 CSF2RBP32927 897 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ETV3P41162 512 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 GPR3P46089 330 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms