RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 ZNF398Q8TD17 642 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 TCP10LQ8TDR4 215 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SLC44A1Q8WWI5 657 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 PPWD1Q96BP3 646 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 QRFPRQ96P65 431 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SLC6A16Q9GZN6 736 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 ELOVL6Q9H5J4 265 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 SUDS3Q9H7L9 328 aaPredicted RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 ACTR8Q9H981 624 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 INTS10Q9NVR2 710 aaKnown RBP5.54□□□□□ -1.52
CHD2-227ENST00000637572 VWA7Q9Y334 891 aa5.54□□□□□ -1.52
CHD2-227ENST00000637572 MYH9P35579 1960 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 SPTA1P02549 2419 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 EDDM13A0A1B0GTR0 161 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 LEFTY2O00292 366 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 MEFVO15553 781 aaPredicted RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 EPHX1P07099 455 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RHOP08100 348 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 THRAP10827 490 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ZNF30P17039 623 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 DNAJB1P25685 340 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 MC4RP32245 332 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CCNG1P51959 295 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RAP1GDS1P52306 607 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 BMPR2Q13873 1038 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 LRRC32Q14392 662 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CA9Q16790 459 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PACS1Q6VY07 963 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 HFE2Q6ZVN8 426 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TRPM8Q7Z2W7 1104 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PRPF39Q86UA1 669 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 TRAPPC5Q8IUR0 188 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 OR2AP1Q8NGE2 309 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ASZ1Q8WWH4 475 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CENPIQ92674 756 aaPredicted RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 HDAC10Q969S8 669 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 SEC16BQ96JE7 1060 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 SERAC1Q96JX3 654 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RBBP8Q99708 897 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 SH3GL1Q99961 368 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RHOBTB2Q9BYZ6 727 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RMND5AQ9H871 391 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 FBRSQ9HAH7 460 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 GGA2Q9UJY4 613 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 AP3M1Q9Y2T2 418 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 GPSM3Q9Y4H4 160 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 NOTCH2Q04721 2471 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ZFHX2Q9C0A1 2572 aaPredicted RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 KANSL1LA0AUZ9 987 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PRAMEF11O60813 436 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 SOCS5O75159 536 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 GUCY1B2O75343 617 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 BAG2O95816 211 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ESR1P03372 595 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 UGT2B4P06133 528 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 FMO4P31512 558 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 LIG3P49916 1009 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 NAA25Q14CX7 972 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 OASLQ15646 514 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 CRY1Q16526 586 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TSTD2Q5T7W7 516 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TTC27Q6P3X3 843 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TREML1Q86YW5 311 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PHYKPLQ8IUZ5 450 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ETFBKMTQ8IXQ9 262 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 IQCKQ8N0W5 287 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ZNF655Q8N720 491 aaPredicted RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 SLC43A3Q8NBI5 491 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CCDC124Q96CT7 223 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 OSGEPL1Q9H4B0 414 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 FAM83DQ9H4H8 585 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 C10orf88Q9H8K7 445 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 GDE1Q9NZC3 331 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CACNG4Q9UBN1 327 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 FOXD3Q9UJU5 478 aaPredicted RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 CHKBQ9Y259 395 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 RRP15Q9Y3B9 282 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 MYO18BQ8IUG5 2567 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ECM29Q5VYK3 1845 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 MYH11P35749 1972 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 DLEC1Q9Y238 1755 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CCDC189A1A4V9 331 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 EVPLLA8MZ36 301 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 BTN3A1O00481 513 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 COCHO43405 550 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TCEA3O75764 348 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 BMP10O95393 424 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 TBX18O95935 607 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 CTSEP14091 401 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PKMP14618 531 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 CSKP41240 450 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 PTGER3P43115 390 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 OGDHQ02218 1023 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 BOP1Q14137 746 aaKnown RBP5.53□□□□□ -1.52
CHD2-227ENST00000637572 CNGA3Q16281 694 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 ITPRIPL2Q3MIP1 535 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 EOGTQ5NDL2 527 aa5.53□□□□□ -1.52
CHD2-227ENST00000637572 MPP7Q5T2T1 576 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms