RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 GUSBP11Q6P575 273 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 C6orf15Q6UXA7 325 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 Q6ZR03 302 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 LRRC8DQ7L1W4 858 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ATG9AQ7Z3C6 839 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 PROSER2Q86WR7 435 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TMTC1Q8IUR5 882 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ODF3L1Q8IXM7 274 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 FAM186BQ8IYM0 893 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 NLGN4XQ8N0W4 816 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 C6orf223Q8N319 242 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 CHCHD4Q8N4Q1 142 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 FITM2Q8N6M3 262 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF525Q8N782 197 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 KLHDC1Q8N7A1 406 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 C15orf56Q8N910 161 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 CARMIL3Q8ND23 1372 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 PHC3Q8NDX5 983 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 NPLOC4Q8TAT6 608 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TBC1D15Q8TC07 691 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 NPRL2Q8WTW4 380 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 RUFY2Q8WXA3 655 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ASB15Q8WXK1 588 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 FRZBQ92765 325 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TNFRSF14Q92956 283 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 RNF34Q969K3 372 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 R3HDM4Q96D70 268 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 CALML4Q96GE6 196 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 EGLN2Q96KS0 407 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 RNF145Q96MT1 663 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 FAM218AQ96MZ4 157 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 NECTIN4Q96NY8 510 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TECTBQ96PL2 329 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 GBP4Q96PP9 640 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ODF3Q96PU9 254 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 USP28Q96RU2 1077 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TTC1Q99614 292 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 KCNJ15Q99712 375 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 WDR77Q9BQA1 342 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 MRI1Q9BV20 369 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 CNPPD1Q9BV87 410 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 PLA2G2FQ9BZM2 168 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 MIR1-1HGQ9H1L0 117 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 LHX5Q9H2C1 402 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ADNPQ9H2P0 1102 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ZNF106Q9H2Y7 1883 aaKnown RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TUBB1Q9H4B7 451 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 RAD21L1Q9H4I0 556 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 NANOGQ9H9S0 305 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ARNT2Q9HBZ2 717 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 MED4Q9NPJ6 270 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 GDF3Q9NR23 364 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 STARD5Q9NSY2 213 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 CCM2LQ9NUG4 571 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ARL8BQ9NVJ2 186 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 DDX18Q9NVP1 670 aaKnown RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 FBXO34Q9NWN3 711 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ADPRHL2Q9NX46 363 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 WRAP73Q9P2S5 460 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 SUCOQ9UBS9 1254 aaKnown RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 SIX4Q9UIU6 781 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 GJD2Q9UKL4 321 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 TRPC5Q9UL62 973 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 MOKQ9UQ07 419 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 MTF2Q9Y483 593 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 RAI2Q9Y5P3 530 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 SOX21Q9Y651 276 aaPredicted RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 ATP23Q9Y6H3 246 aa-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 APOBP04114 4563 aaKnown RBP-1.02□□□□□ -2.57
CDKL5-210ENST00000636046 KIAA1217Q5T5P2 1943 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ITPR2Q14571 2701 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SPATA31A3Q5VYP0 1347 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 MYPNQ86TC9 1320 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IGHV4-4A0A075B6R2 117 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 IGKV2-40A0A087WW87 121 aaPredicted RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 A0A1B0GUA9 196 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CCDC189A1A4V9 331 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 DYTNA2CJ06 578 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 C19orf71A6NCJ1 209 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SDHAF1A6NFY7 115 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SAC3D1A6NKF1 404 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ISM1B1AKI9 464 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 GOLGA6L22H0YM25 854 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TMX2-CTNND1H3BSU7 103 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 AP4M1O00189 453 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RHODO00212 210 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ARNTLO00327 626 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 BET1O15155 118 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 SMAD9O15198 467 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FOXP2O15409 715 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 LDB2O43679 373 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 ITM2AO43736 263 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 KIF5CO60282 957 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 CPNE3O75131 537 aaKnown RBP-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 TIPRLO75663 272 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 OFD1O75665 1012 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 GPX5O75715 221 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 PIAS2O75928 621 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 RGS11O94810 467 aa-1.03□□□□□ -2.57
CDKL5-210ENST00000636046 FAM13AO94988 1023 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms