RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CLP1Q92989 425 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 AP1S3Q96PC3 154 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TBC1D10AQ9BXI6 508 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM121BQ9BXQ6 578 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 EQTNQ9NQ60 294 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 C3orf18Q9UK00 162 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 WASF3Q9UPY6 502 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TEX13CA0A0J9YWL9 993 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TRAFD1O14545 582 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SREBF1P36956 1147 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PLK1P53350 603 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 OAZ1P54368 228 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PER3P56645 1201 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LAPTM5Q13571 262 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PCID2Q5JVF3 399 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PDSS1Q5T2R2 415 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 HIPK1Q86Z02 1210 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DENND6BQ8NEG7 585 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FNIP1Q8TF40 1166 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DLG3Q92796 817 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FCRL4Q96PJ5 515 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 MGME1Q9BQP7 344 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ZFP14Q9HCL3 533 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 MORF4L1Q9UBU8 362 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FBXO9Q9UK97 447 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CLUHO75153 1309 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 MYO9BQ13459 2157 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 IQSEC2Q5JU85 1478 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DYTNA2CJ06 578 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 L7N2F9 121 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LAMP2P13473 410 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LPOP22079 712 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 IDSP22304 550 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 VAMP2P63027 116 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 KCNMA1Q12791 1236 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PLA2G4EQ3MJ16 856 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DUPD1Q68J44 220 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CAPN13Q6MZZ7 669 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TTC27Q6P3X3 843 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FAM83AQ86UY5 434 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PSTKQ8IV42 348 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF527Q8NB42 609 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TRPV1Q8NER1 839 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SMPDL3BQ92485 455 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 VCPIP1Q96JH7 1222 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ZIM3Q96PE6 472 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PANX1Q96RD7 426 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DPEP2Q9H4A9 486 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 NR2E1Q9Y466 385 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ASTN2O75129 1339 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 A0A1W2PQ67 120 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 M0R129 80 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 RFXANKO14593 260 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TSPAN1O60635 241 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ABL2P42684 1182 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CXCR3P49682 368 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ALDH5A1P51649 535 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CCL23P55773 120 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PRR5P85299 388 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CRY2Q49AN0 593 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 C5orf22Q49AR2 442 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LCN1P1Q5VSP4 162 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 IRGCQ6NXR0 463 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SMIM5Q71RC9 77 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SATL1Q86VE3 508 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TMPRSS6Q8IU80 811 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CLEC10AQ8IUN9 316 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ARMC10Q8N2F6 343 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PIH1D2Q8WWB5 315 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 RXFP1Q9HBX9 757 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SGK2Q9HBY8 427 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DEC1Q9P2X7 70 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LEF1Q9UJU2 399 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PTPRJQ12913 1337 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ADGRL2O95490 1459 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 OR1I1O60431 355 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CAMTA2O94983 1202 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 AMPD1P23109 780 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ABATP80404 500 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TBX2Q13207 712 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 DGCR6Q14129 220 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PARP6Q2NL67 630 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CRTC3Q6UUV7 619 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 RIOX2Q8IUF8 465 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 EPS8L3Q8TE67 593 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ABHD5Q8WTS1 349 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ATG4AQ8WYN0 398 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PNPLA2Q96AD5 504 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 POP1Q99575 1024 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 AARSD1Q9BTE6 412 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TM6SF2Q9BZW4 377 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SEC14L3Q9UDX4 400 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 TET3O43151 1660 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GPR75-ASB3A0A0A6YYF3 556 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PER2O15055 1255 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SUV39H1O43463 412 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 RECQL4O94761 1208 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PROSCO94903 275 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms