RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CORO7P57737 925 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FMO1Q01740 532 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ITKQ08881 620 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF844Q08AG5 666 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CETN1Q12798 172 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA7BQ2TAP0 167 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MBLAC2Q68D91 279 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZCCHC8Q6NZY4 707 aaKnown RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TMPRSS7Q7RTY8 843 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MAATS1Q7Z4T9 603 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MFN1Q8IWA4 741 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CCDC117Q8IWD4 279 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CFAP52Q8N1V2 620 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 OR14C36Q8NHC7 312 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 WFDC5Q8TCV5 224 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ISL2Q96A47 359 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 NAP1L3Q99457 506 aaPredicted RBP4.93□□□□□ -1.62
LINC00550-201ENST00000629293 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 MIS12Q9H081 205 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TSPYL1Q9H0U9 437 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 FAM114A2Q9NRY5 505 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 COX16Q9P0S2 106 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 GGA2Q9UJY4 613 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 NCKAP1Q9Y2A7 1128 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 TRAF6Q9Y4K3 522 aa4.93□□□□□ -1.62
LINC00550-201ENST00000629293 CKAP5Q14008 2032 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3DA0A087WVF3 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3IA0A087WXS9 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3EA0A087X179 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3KA0A087X1G2 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3FA6NER0 549 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 YJEFN3A6XGL0 299 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3LB9A6J9 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 E7ENQ6 273 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 MYO1FO00160 1098 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 MID1O15344 667 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 DAPK3O43293 454 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TNFSF14O43557 240 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RNASEH1O60930 286 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RTN2O75298 545 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 FBXO21O94952 628 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TIAF1O95411 115 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CALCAP01258 141 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 IL1BP01584 269 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 FTLP02792 175 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 FAM163BP0C2L3 166 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3HP0C7X1 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 NR1D1P20393 614 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CTNNA2P26232 953 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 HOXD9P28356 352 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 GTF2H1P32780 548 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CD70P32970 193 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PSMD8P48556 350 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SGSHP51688 502 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TARDBPQ13148 414 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CDH18Q13634 790 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 DHX34Q14147 1143 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 EIF4HQ15056 248 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CYP1B1Q16678 543 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 ACCSLQ4AC99 568 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 MPPE1Q53F39 396 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TAF1BQ53T94 588 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3GQ6DHY5 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3CQ6IPX1 549 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PHACTR4Q8IZ21 702 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TBC1D3Q8IZP1 549 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 KRT35Q92764 455 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SERAC1Q96JX3 654 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SLC13A1Q9BZW2 595 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 EPB41L4BQ9H329 900 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TMEM8AQ9HCN3 771 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SERGEFQ9UGK8 458 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TSPAN16Q9UKR8 245 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF510Q9Y2H8 683 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SLC27A6Q9Y2P4 619 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PCDHA3Q9Y5H8 950 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 ALG6Q9Y672 507 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 FLNCQ14315 2725 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PLXNB3Q9ULL4 1909 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PHF2O75151 1096 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 DLDP09622 509 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 HNF1BP35680 557 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 MARCKSL1P49006 195 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 DRG2P55039 364 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RPS24P62847 133 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TMPRSS15P98073 1019 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PDCLQ13371 301 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 HLTFQ14527 1009 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 MLC1Q15049 377 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RNFT1Q5M7Z0 435 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 AGBL2Q5U5Z8 902 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 BSPRYQ5W0U4 402 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF776Q68DI1 518 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 KCTD16Q68DU8 428 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 ZDHHC24Q6UX98 284 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms