RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ACTL7BQ9Y614 415 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 ARL5AQ9Y689 179 aa9.97□□□□□ -0.81
SOX2-OT-244ENST00000627738 REV3LO60673 3130 aa9.96□□□□□ -0.81
SOX2-OT-244ENST00000627738 ANKRD36A6QL64 1941 aa9.96□□□□□ -0.81
SOX2-OT-244ENST00000627738 CCL22O00626 93 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 AURKAO14965 403 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SOCS5O75159 536 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SPAG7O75391 227 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 POP4O95707 220 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CRTAMO95727 393 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 MT-ND3P03897 115 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SNRPAP09012 282 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 BMP1P13497 986 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CTPS1P17812 591 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CNTFP26441 200 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SERPINA4P29622 427 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 GP5P40197 560 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 OPRD1P41143 372 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 RECQLP46063 649 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 GRIA4P48058 902 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 ARSDP51689 593 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 ST8SIA6P61647 398 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TMPRSS15P98073 1019 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 RAD51Q06609 339 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 THOC5Q13769 683 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 PTPRRQ15256 657 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TAF1AQ15573 450 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 GRTP1Q5TC63 336 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 MROH9Q5TGP6 573 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TTC19Q6DKK2 380 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 MTSS1LQ765P7 747 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 GLT6D1Q7Z4J2 308 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 STRA8Q7Z7C7 330 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CHST14Q8NCH0 376 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR13C4Q8NGS5 318 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR2A12Q8NGT7 310 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 FRS2Q8WU20 508 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 STYXQ8WUJ0 223 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 PIH1D2Q8WWB5 315 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 HDAC10Q969S8 669 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 VOPP1Q96AW1 172 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SERAC1Q96JX3 654 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 DNAJC1Q96KC8 554 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TBATAQ96M53 351 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TUBGCP5Q96RT8 1024 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SMC6Q96SB8 1091 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CPEB1Q9BZB8 566 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZDHHC6Q9H6R6 413 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 CNOT10Q9H9A5 744 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF358Q9NW07 568 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 GGT7Q9UJ14 662 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 RIMKLBQ9ULI2 386 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC8A2Q9UPR5 921 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 NUMBLQ9Y6R0 609 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 COL4A3Q01955 1670 aa9.96□□□□□ -0.82
SOX2-OT-244ENST00000627738 TMEM120BA0PK00 339 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 HMX2A2RU54 273 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 TBC1D3BA6NDS4 549 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 C2orf81A6NN90 581 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 WASH3PC4AMC7 463 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 GOLGA8RI6L899 631 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 WIPF1O43516 503 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 PRMT3O60678 531 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SIN3BO75182 1162 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 RPP40O75818 363 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 DKK1O94907 266 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC4A1P02730 911 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 UGT2B4P06133 528 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ITGA2BP08514 1039 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ALPIP09923 528 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CHN1P15882 459 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 KRT4P19013 534 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 MDH1P40925 334 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF140P52738 457 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CSE1LP55060 971 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 RPL26P61254 145 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 PRAMEP78395 509 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 MPP1Q00013 466 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 GUCY1A3Q02108 690 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ACVR1Q04771 509 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 HTR4Q13639 388 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 GRM3Q14832 879 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CCDC85BQ15834 202 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ITPRIPL2Q3MIP1 535 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 NEPROQ6NW34 567 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 PTAR1Q7Z6K3 402 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZSWIM9Q86XI8 627 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 DENND6AQ8IWF6 608 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SFTPA1Q8IWL2 248 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CNTN4Q8IWV2 1026 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 TTC30BQ8N4P2 665 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 OTUD6BQ8N6M0 293 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF366Q8N895 744 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ANKRD42Q8N9B4 389 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 TERB1Q8NA31 727 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR6P1Q8NGX9 317 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms