RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 FRMD8Q9BZ67 464 aaPredicted RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 DHX35Q9H5Z1 703 aaKnown RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SP110Q9HB58 689 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 GPATCH2LQ9NWQ4 482 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 B4GALT6Q9UBX8 382 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SEPT3Q9UH03 358 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 PCDHGA3Q9Y5H0 932 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 PTPN13Q12923 2485 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 B4DGG1 531 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 TERTO14746 1132 aaKnown RBP16.5■□□□□ 0.23
TRIM29-221ENST00000627238 ZW10O43264 779 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 CEACAM5P06731 702 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 ATP1A3P13637 1013 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 HSPA9P38646 679 aaKnown RBP16.5■□□□□ 0.23
TRIM29-221ENST00000627238 GPR3P46089 330 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 TRA2AQ13595 282 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIM29-221ENST00000627238 C16orf72Q14CZ0 275 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 TMEM164Q5U3C3 297 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 PIM3Q86V86 326 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 EXTL1Q92935 676 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 USP7Q93009 1102 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 PEBP4Q96S96 227 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 FAM117AQ9C073 453 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 SEMA6CQ9H3T2 930 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 SPATS2LQ9NUQ6 558 aaKnown RBP16.5■□□□□ 0.23
TRIM29-221ENST00000627238 PCDHB11Q9Y5F2 797 aa16.5■□□□□ 0.23
TRIM29-221ENST00000627238 HEMK1Q9Y5R4 338 aaPredicted RBP16.5■□□□□ 0.23
TRIM29-221ENST00000627238 COL12A1Q99715 3063 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 TMEM191CA6NGB0 347 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 HEXIM1O94992 359 aaKnown RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PEX11BO96011 259 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 FUCA1P04066 466 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 FGF1P05230 155 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PSMA2P25787 234 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 SCNN1BP51168 640 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 UBXN1Q04323 297 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PEX6Q13608 980 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 DPYSQ14117 519 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 LBRQ14739 615 aaKnown RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 CNGA3Q16281 694 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 SDK2Q58EX2 2172 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 RALGPS1Q5JS13 557 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 ARHGAP36Q6ZRI8 547 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 ZFAND4Q86XD8 727 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 ZSCAN1Q8NBB4 408 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 ZDHHC1Q8WTX9 485 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 NUS1Q96E22 293 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 DTD2Q96FN9 168 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 SCARF2Q96GP6 870 aaPredicted RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PCMTD1Q96MG8 357 aaPredicted RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 GSDMCQ9BYG8 508 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PHPT1Q9NRX4 125 aaPredicted RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 TAS2R14Q9NYV8 317 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 AKAP7Q9P0M2 348 aaPredicted RBP16.49■□□□□ 0.23
TRIM29-221ENST00000627238 IL17BQ9UHF5 180 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 PPIL1Q9Y3C6 166 aa16.49■□□□□ 0.23
TRIM29-221ENST00000627238 FLNCQ14315 2725 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 STMND1H3BQB6 276 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 DAPK3O43293 454 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 SUV39H1O43463 412 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 IVLP07476 585 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 WT1P19544 449 aaPredicted RBP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 NFKBIAP25963 317 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 VIPR1P32241 457 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 MYL5Q02045 173 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 DPTQ07507 201 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 SLC10A7Q0GE19 358 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 ILF3Q12906 894 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 ACOX1Q15067 660 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 TBR1Q16650 682 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 PHF19Q5T6S3 580 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 ZNF574Q6ZN55 896 aaPredicted RBP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 PRICKLE2Q7Z3G6 844 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 MCCC1Q96RQ3 725 aaPredicted RBP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 DPYSL5Q9BPU6 564 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 MGME1Q9BQP7 344 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 ARHGAP9Q9BRR9 750 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 CARS2Q9HA77 564 aaKnown RBP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
TRIM29-221ENST00000627238 TAAR2Q9P1P5 351 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 SLC17A4Q9Y2C5 497 aa16.48■□□□□ 0.23
TRIM29-221ENST00000627238 IGHV5-10-1A0A0J9YXX1 117 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 DFFAO00273 331 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 PRPSAP2O60256 369 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 LRCH4O75427 683 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 RNF8O76064 485 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 CD1CP29017 333 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 MIPP30301 263 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 ARSDP51689 593 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 LIMK2P53671 638 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 MAPK10P53779 464 aa16.47■□□□□ 0.23
TRIM29-221ENST00000627238 MAZP56270 477 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms