RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FTSJ1Q9UET6 329 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 MFHAS1Q9Y4C4 1052 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 HS3ST3A1Q9Y663 406 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 VPS13AQ96RL7 3174 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 IGLON5A6NGN9 336 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 A6NNZ2 444 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 RNF103O00237 685 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 WNT9AO14904 365 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 INSIG1O15503 277 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 TNFSF14O43557 240 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 TM7SF2O76062 418 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 TIAF1O95411 115 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 PIGNO95427 931 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 LDOC1O95751 146 aaPredicted RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 FTH1P19P0C7X4 201 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 TCF4P15884 667 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 HSPA9P38646 679 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 RABIFP47224 123 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 CSNK1DP48730 415 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SCNN1BP51168 640 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 GP2P55259 537 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 CLDN2P57739 230 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 FAM193AP78312 1265 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SHC2P98077 582 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SLC25A11Q02978 314 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 ITKQ08881 620 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 NSUN2Q08J23 767 aaKnown RBP eCLIP6.45□□□□□ -1.38
TCF4-249ENST00000625716 DPYSQ14117 519 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 MESDQ14696 234 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 PDK2Q15119 407 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 CCDC157Q569K6 752 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 AFMIDQ63HM1 303 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SEL1L3Q68CR1 1132 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 BRAT1Q6PJG6 821 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SARM1Q6SZW1 724 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 DBX2Q6ZNG2 339 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 Q6ZSR6 202 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 CYP4V2Q6ZWL3 525 aaPredicted RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 POLNQ7Z5Q5 900 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 DTX1Q86Y01 620 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 GATAD2AQ86YP4 633 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 LRRC49Q8IUZ0 686 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 RHOT2Q8IXI1 618 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 ATPAF2Q8N5M1 289 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 SLC35G2Q8TBE7 412 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 ASB12Q8WXK4 309 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 CSPG4P5Q96PW8 444 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 TUBGCP5Q96RT8 1024 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 WRAP53Q9BUR4 548 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 MAK16Q9BXY0 300 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 PACSIN1Q9BY11 444 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 BHLHE41Q9C0J9 482 aaPredicted RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 KCNF1Q9H3M0 494 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 PCDH18Q9HCL0 1135 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 LUC7LQ9NQ29 371 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 RCOR3Q9P2K3 495 aaPredicted RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 DKK3Q9UBP4 350 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 LHX3Q9UBR4 397 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 ZFR2Q9UPR6 939 aaKnown RBP6.45□□□□□ -1.38
TCF4-249ENST00000625716 CA5BQ9Y2D0 317 aa6.45□□□□□ -1.38
TCF4-249ENST00000625716 PCDH15Q96QU1 1955 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NEMP2A6NFY4 417 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 C10orf142B7Z368 130 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 CBFA2T3O75081 653 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 IPO7O95373 1038 aaKnown RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 ALPPL2P10696 532 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 KRT10P13645 584 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 EPHA8P29322 1005 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 MAN1A1P33908 653 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 MAGEA1P43355 309 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NOP2P46087 812 aaKnown RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 RXRGP48443 463 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 THOP1P52888 689 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 AP1S1P61966 158 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 BNIP3Q12983 259 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 PTK2BQ14289 1009 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 SPA17Q15506 151 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 UGP2Q16851 508 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ASTE1Q2TB18 679 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 TMEM52BQ4KMG9 183 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ANKRD20A8PQ5CZ79 823 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 LRRC73Q5JTD7 316 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 MARC1Q5VT66 337 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 TIGD7Q6NT04 549 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 ARHGAP36Q6ZRI8 547 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 GLRX5Q86SX6 157 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 SPATS2Q86XZ4 545 aaKnown RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 CAMK1DQ8IU85 385 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ARHGAP12Q8IWW6 846 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NDUFAF2Q8N183 169 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 CHCHD4Q8N4Q1 142 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 EID2Q8N6I1 236 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NPWQ8N729 165 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms