RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ATXN7L2Q5T6C5 722 aaPredicted RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 KYAT3Q6YP21 454 aaKnown RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 SLC25A45Q8N413 288 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 GDAP1L1Q96MZ0 367 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 AGAP3Q96P47 875 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 MGME1Q9BQP7 344 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 OSBPL1AQ9BXW6 950 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 GPR27Q9NS67 375 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 HS3ST3A1Q9Y663 406 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 CFAP69A5D8W1 941 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 TRIM38O00635 465 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 SIGLEC6O43699 453 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 DGKAP23743 735 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 HSPA9P38646 679 aaKnown RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 CLDN6P56747 220 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 MYLK3Q32MK0 819 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 Q6ZSR6 202 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 DCP2Q8IU60 420 aaKnown RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 ZNF567Q8N184 647 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 VOPP1Q96AW1 172 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 IFT43Q96FT9 208 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 VAT1Q99536 393 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 FERMT1Q9BQL6 677 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 DDX47Q9H0S4 455 aaKnown RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 AMACRQ9UHK6 382 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 LHX6Q9UPM6 363 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 ITM2BQ9Y287 266 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 DRG1Q9Y295 367 aaKnown RBP20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 ATP8A1Q9Y2Q0 1164 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 TTLL3Q9Y4R7 772 aa20.05■□□□□ 0.8
R3HCC1-210ENST00000625275 NEMP1O14524 444 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 RAD51BO15315 384 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 ZNF189O75820 626 aaPredicted RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 PIAS2O75928 621 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 NEBLO76041 1014 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 IGSF6O95976 241 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 PAK4O96013 591 aaPredicted RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 JUPP14923 745 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 COILP38432 576 aaPredicted RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 CYP4F3Q08477 520 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 TUBB2AQ13885 445 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 HES3Q5TGS1 186 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 CCDC137Q6PK04 289 aaKnown RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 ZNF572Q7Z3I7 529 aaPredicted RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 SPATA4Q8NEY3 305 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 OR4C6Q8NH72 309 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 RTP4Q96DX8 246 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 BMFQ96LC9 184 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 TEKT5Q96M29 485 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 KLHL32Q96NJ5 620 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 TUBB2BQ9BVA1 445 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 C1QTNF2Q9BXJ5 285 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 UCKL1Q9NWZ5 548 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 KLHL8Q9P2G9 620 aaPredicted RBP20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 GGT7Q9UJ14 662 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 RAXQ9Y2V3 346 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 GPSM3Q9Y4H4 160 aa20.04■□□□□ 0.8
R3HCC1-210ENST00000625275 TTC24A2A3L6 582 aaPredicted RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 POM121BA6NF01 834 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 CCDC188H7C350 402 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 SPINT1O43278 529 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 STK10O94804 968 aaKnown RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 CR2P20023 1033 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 ACP1P24666 158 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 STIP1P31948 543 aaKnown RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 FNTAP49354 379 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 CKAP4Q07065 602 aaKnown RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 NSUN2Q08J23 767 aaKnown RBP eCLIP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 SGCGQ13326 291 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 DNTTIP2Q5QJE6 756 aaKnown RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 ALG1LQ6GMV1 187 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 GDPD4Q6W3E5 623 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 DENND6BQ8NEG7 585 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 CCDC110Q8TBZ0 833 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 NXPE2Q96DL1 559 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 SPATA13Q96N96 652 aa20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 KLF6Q99612 283 aaPredicted RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 POLR1EQ9GZS1 481 aaKnown RBP20.03■□□□□ 0.8
R3HCC1-210ENST00000625275 C5orf60A6NFR6 353 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 IGLON5A6NGN9 336 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 FFAR2O15552 330 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 CD68P34810 354 aaPredicted RBP20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 RABIFP47224 123 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 SCNN1BP51168 640 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 RAD51Q06609 339 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ITKQ08881 620 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 KCTD19Q17RG1 926 aaPredicted RBP20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ANKRD20A2Q5SQ80 823 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ANKRD20A1Q5TYW2 823 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ANKRD20A3Q5VUR7 823 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 GLIS1Q8NBF1 620 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ATL2Q8NHH9 583 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 ASB12Q8WXK4 309 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 LENG8Q96PV6 779 aaPredicted RBP20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 HAUS2Q9NVX0 235 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 DNAJC28Q9NX36 388 aa20.02■□□□□ 0.8
R3HCC1-210ENST00000625275 TRHDEQ9UKU6 1024 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms