RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 CATSPERZQ9NTU4 200 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 UTP6Q9NYH9 597 aaKnown RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 C6orf203Q9P0P8 240 aaPredicted RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 SEPT3Q9UH03 358 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 PSMD13Q9UNM6 376 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 NT5C1B-RDH14C9J2C7 533 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBFD1O14562 309 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 GPC4O75487 556 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SUPT7LO94864 414 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CD1DP15813 335 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 ATF6P18850 670 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 XRCC1P18887 633 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 DPP6P42658 865 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC11A2P49281 568 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SUOXP51687 545 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CDH4P55283 916 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PKNOX1P55347 436 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 HERVK_113P63132 956 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TIAL1Q01085 375 aaKnown RBP eCLIP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 STX5Q13190 355 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CEACAM7Q14002 265 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SEMA3AQ14563 771 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SFT2D3Q587I9 215 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 IL31Q6EBC2 164 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR52E8Q6IFG1 317 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZFP1Q6P2D0 407 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 GK5Q6ZS86 529 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PQLC1Q8N2U9 271 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR7D4Q8NG98 312 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR52K2Q8NGK3 314 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 SH3RF2Q8TEC5 729 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 USP13Q92995 863 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PTERQ96BW5 349 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TMA16Q96EY4 203 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRIB3Q96RU7 358 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TMEM175Q9BSA9 504 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TTPALQ9BTX7 342 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 ERVK-6Q9BXR3 956 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 HCSTQ9UBK5 93 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZFP37Q9Y6Q3 630 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PSMD12O00232 456 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 HOXA2O43364 376 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 UPP2O95045 317 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CRTAMO95727 393 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 GALTP07902 379 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 LYNP07948 512 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PIRTP0C851 137 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBTFL6P0CB48 400 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PMLP29590 882 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 STC1P52823 247 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 FASTKQ14296 549 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TYSND1Q2T9J0 566 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 UNC50Q53HI1 259 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 LHX8Q68G74 356 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PRSS55Q6UWB4 352 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 TAS1R1Q7RTX1 841 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 RAET1EQ8TD07 263 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 DLG3Q92796 817 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CDKN2AIPNLQ96HQ2 116 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 ASB2Q96Q27 587 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 AARSD1Q9BTE6 412 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 CINPQ9BW66 212 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 MRPL9Q9BYD2 267 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 NACA2Q9H009 215 aa8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 INTS10Q9NVR2 710 aaKnown RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 NLE1Q9NVX2 485 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 MTF2Q9Y483 593 aaPredicted RBP8.32□□□□□ -1.08
SND1-IT1-201ENST00000623342 STX16-NPEPL1H3BU86 382 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 KDELR3O43731 214 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 BCAS2O75934 225 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 UQCRBP14927 111 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF37AP17032 561 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ALDH1A3P47895 512 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 AQP4P55087 323 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 OXCT1P55809 520 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MS4A2Q01362 244 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PDAP1Q13442 181 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 BFSP2Q13515 415 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PTK2BQ14289 1009 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 GPNMBQ14956 572 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PPP1R3AQ16821 1122 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 OGFRL1Q5TC84 451 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CLEC6AQ6EIG7 209 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TMEM173Q86WV6 379 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CLYBLQ8N0X4 340 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PTGR2Q8N8N7 351 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PDZD8Q8NEN9 1154 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 BHLHE22Q8NFJ8 381 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 RHEBL1Q8TAI7 183 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 HMGCLL1Q8TB92 370 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CD99L2Q8TCZ2 262 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms