RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 MAGEE2Q8TD90 523 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 CCDC126Q96EE4 140 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 SH3YL1Q96HL8 342 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 TEKT5Q96M29 485 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 LHPPQ9H008 270 aa13.07□□□□□ -0.32
CHD1L-210ENST00000622533 AAR2Q9Y312 384 aaKnown RBP13.07□□□□□ -0.32
CHD1L-210ENST00000622533 H3BRB1 525 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PSMD11O00231 422 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 STMN1P16949 149 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 NFKB1P19838 968 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 AXLP30530 894 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 LRPAP1P30533 357 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 ZNF460Q14592 562 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PSMD5Q16401 504 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PCID2Q5JVF3 399 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 IRAK1BP1Q5VVH5 260 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 KDM1BQ8NB78 822 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 CGREF1Q99674 301 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 MRPL57Q9BQC6 102 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 MRPL46Q9H2W6 279 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 EML4Q9HC35 981 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 RBPJLQ9UBG7 517 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PSME2Q9UL46 239 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 TLL2Q9Y6L7 1015 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 HCRTO43612 131 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 DLX3O60479 287 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SYNCRIPO60506 623 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 RECQL4O94761 1208 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 F9P00740 461 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 NMBRP28336 390 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SMUG1Q53HV7 270 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SEPT8Q92599 483 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 RAD21L1Q9H4I0 556 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 TMPRSS4Q9NRS4 437 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 XPR1Q9UBH6 696 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 ERVK-11Q9UQG0 969 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 CCDC162PA2VCL2 907 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SRP72O76094 671 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 ZNF286BP0CG31 522 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 TKTL1P51854 596 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 GRSF1Q12849 480 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SQLEQ14534 574 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 MAPK11Q15759 364 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 INAQ16352 499 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 ZIK1Q3SY52 487 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 KLHDC8BQ8IXV7 354 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 DHRSXQ8N5I4 330 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 USP33Q8TEY7 942 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 DUS3LQ96G46 650 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 FEM1CQ96JP0 617 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 ZNF347Q96SE7 839 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 R3HDMLQ9H3Y0 253 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 TXNRD2Q9NNW7 524 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 TMEM9Q9P0T7 183 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SCHIP1Q9P0W5 487 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 WARS2Q9UGM6 360 aaKnown RBP13.06□□□□□ -0.32
CHD1L-210ENST00000622533 SARDHQ9UL12 918 aa13.06□□□□□ -0.32
CHD1L-210ENST00000622533 DHRS12A0PJE2 317 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 RRN3P2A6NIE6 340 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CLDN25C9JDP6 229 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 C9JVG2 144 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 PAMP19021 973 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 TMBIM6P55061 237 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 AQP6Q13520 282 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
CHD1L-210ENST00000622533 INTS11Q5TA45 600 aaKnown RBP13.05□□□□□ -0.32
CHD1L-210ENST00000622533 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 FAM35AQ86V20 835 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CENPLQ8N0S6 344 aaPredicted RBP13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
CHD1L-210ENST00000622533 TSGA13Q96PP4 275 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CTRCQ99895 268 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 ADAMTS10Q9H324 1103 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 TNFRSF12AQ9NP84 129 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 CCM2LQ9NUG4 571 aaPredicted RBP13.05□□□□□ -0.32
CHD1L-210ENST00000622533 ARMC1Q9NVT9 282 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 TMEM181Q9P2C4 612 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 NRCAMQ92823 1304 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 ACOX3O15254 700 aa13.05□□□□□ -0.32
CHD1L-210ENST00000622533 KCNE1P15382 129 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms