RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 BEST2Q8NFU1 509 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 HES6Q96HZ4 224 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 TTC14Q96N46 770 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 FUZQ9BT04 418 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 HCN3Q9P1Z3 774 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 DGKBQ9Y6T7 804 aa4.36□□□□□ -1.71
BRCA1-229ENST00000621897 PDS5AQ29RF7 1337 aaKnown RBP4.36□□□□□ -1.71
BRCA1-229ENST00000621897 TMEM202A6NGA9 273 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 PRSS47A8MTI9 375 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 LDLRAD4O15165 306 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 CREB3O43889 395 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 GUCY1B2O75343 617 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TIPRLO75663 272 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TFP02787 698 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 HLA-DOBP13765 273 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 KCNA5P22460 613 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 DDIT3P35638 169 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 CLCN3P51790 818 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TAF12Q16514 161 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 CTF1Q16619 201 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 SLC36A4Q6YBV0 504 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 MARK2Q7KZI7 788 aaKnown RBP4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TAOK1Q7L7X3 1001 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 LINGO2Q7L985 606 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 SLC9B2Q86UD5 537 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TMTC2Q8N394 836 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 NME8Q8N427 588 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 IL17RCQ8NAC3 791 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 OR2AK2Q8NG84 335 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 HUS1BQ8NHY5 278 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 BBS10Q8TAM1 723 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 DUSP19Q8WTR2 217 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 PABPC5Q96DU9 382 aaKnown RBP4.35□□□□□ -1.71
BRCA1-229ENST00000621897 FEM1CQ96JP0 617 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 KLHL15Q96M94 604 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 MMP28Q9H239 520 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 BPIFA1Q9NP55 256 aa4.35□□□□□ -1.71
BRCA1-229ENST00000621897 FBXO9Q9UK97 447 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-229ENST00000621897 TEX13CA0A0J9YWL9 993 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 TNPO2O14787 897 aaKnown RBP4.34□□□□□ -1.71
BRCA1-229ENST00000621897 CRYAAP02489 173 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 HSD3B1P14060 373 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
BRCA1-229ENST00000621897 GALNT2Q10471 571 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 HIST2H2ACQ16777 129 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-229ENST00000621897 SLC9B1Q4ZJI4 515 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-229ENST00000621897 FAM122CQ6P4D5 195 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 CPLX2Q6PUV4 134 aaKnown RBP4.34□□□□□ -1.71
BRCA1-229ENST00000621897 GFRALQ6UXV0 394 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 GDPD4Q6W3E5 623 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 QSOX2Q6ZRP7 698 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 TMEM219Q86XT9 240 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 GPATCH11Q8N954 259 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 SLC20A1Q8WUM9 679 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 PGLYRP2Q96PD5 576 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 UHRF2Q96PU4 802 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 EPYCQ99645 322 aa4.34□□□□□ -1.71
BRCA1-229ENST00000621897 TAF4O00268 1085 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 IFIT1P09914 478 aaKnown RBP4.33□□□□□ -1.72
BRCA1-229ENST00000621897 CDH1P12830 882 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 ITGA2P17301 1181 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MAOAP21397 527 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MCM3P25205 808 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MARK3P27448 753 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 TLE2Q04725 743 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
BRCA1-229ENST00000621897 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 RGMBQ6NW40 437 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 DSG4Q86SJ6 1040 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 ZNF34Q8IZ26 560 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 APOPT1Q96IL0 206 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 PKNOX2Q96KN3 472 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 SCLT1Q96NL6 688 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 NAP1L5Q96NT1 182 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MAF1Q9H063 256 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 PCDH9Q9HC56 1237 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MMP25Q9NPA2 562 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 GPR108Q9NPR9 543 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 KLHL1Q9NR64 748 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 ZFP57Q9NU63 452 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 MCM9Q9NXL9 1143 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 RRN3Q9NYV6 651 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 SCINQ9Y6U3 715 aa4.33□□□□□ -1.72
BRCA1-229ENST00000621897 ERVV-2B6SEH9 535 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 P2RY10O00398 339 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 COX7A2P14406 83 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 S1PR1P21453 382 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 METAP2P50579 478 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA1-229ENST00000621897 HNRNPH2P55795 449 aaKnown RBP4.32□□□□□ -1.72
BRCA1-229ENST00000621897 RPP30P78346 268 aaKnown RBP4.32□□□□□ -1.72
BRCA1-229ENST00000621897 CAMK1Q14012 370 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 KRBA2Q6ZNG9 492 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 WDR63Q8IWG1 891 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 SPATA6LQ8N4H0 392 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 NOC3LQ8WTT2 800 aaKnown RBP4.32□□□□□ -1.72
BRCA1-229ENST00000621897 ABTB1Q969K4 478 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms