RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 KCTD15Q96SI1 283 aaPredicted RBP16.76■□□□□ 0.27
TARDBP-225ENST00000621715 SEMA3CQ99985 751 aa16.76■□□□□ 0.27
TARDBP-225ENST00000621715 TRIM7Q9C029 511 aa16.76■□□□□ 0.27
TARDBP-225ENST00000621715 WDR26Q9H7D7 661 aa16.76■□□□□ 0.27
TARDBP-225ENST00000621715 ATP13A3Q9H7F0 1226 aa16.76■□□□□ 0.27
TARDBP-225ENST00000621715 CARS2Q9HA77 564 aaKnown RBP16.76■□□□□ 0.27
TARDBP-225ENST00000621715 ATMINO43313 823 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-225ENST00000621715 CPNE6O95741 557 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 CALB1P05937 261 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 CCNB1P14635 433 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 TNFAIP3P21580 790 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 LHCGRP22888 699 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 ALDH4A1P30038 563 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 STAT1P42224 750 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 NR1D2Q14995 579 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 ACOX1Q15067 660 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 SYCP1Q15431 976 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 CNGA3Q16281 694 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 RFLNAQ6ZTI6 216 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 HSD11B1LQ7Z5J1 315 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 HEATR4Q86WZ0 1026 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 PGBD5Q8N414 524 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 ZDHHC1Q8WTX9 485 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 FRMD8Q9BZ67 464 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-225ENST00000621715 SEPT11Q9NVA2 429 aaKnown RBP16.75■□□□□ 0.27
TARDBP-225ENST00000621715 SEPT10Q9P0V9 454 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 TAAR2Q9P1P5 351 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 AP4E1Q9UPM8 1137 aa16.75■□□□□ 0.27
TARDBP-225ENST00000621715 PPM1DO15297 605 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 PEX11BO96011 259 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 MYCLP1P12525 358 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 LIFP15018 202 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 ERCC2P18074 760 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SCNN1BP51168 640 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 TLE1Q04724 770 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 BCL2L1Q07817 233 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SLC10A7Q0GE19 358 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SLC30A9Q6PML9 568 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 XKR5Q6UX68 686 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 PIM3Q86V86 326 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 PTRH1Q86Y79 214 aaKnown RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 MCOLN2Q8IZK6 566 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 NAGSQ8N159 534 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 CBARPQ8N350 705 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 AGPAT1Q99943 283 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SYT11Q9BT88 431 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SNRNP25Q9BV90 132 aaKnown RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 CINPQ9BW66 212 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 TEX101Q9BY14 249 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 DHX35Q9H5Z1 703 aaKnown RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 GEMIN8Q9NWZ8 242 aaKnown RBP16.74■□□□□ 0.27
TARDBP-225ENST00000621715 PCSK1NQ9UHG2 260 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 SUFUQ9UMX1 484 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 PCDHGC4Q9Y5F7 938 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 B3GALT1Q9Y5Z6 326 aa16.74■□□□□ 0.27
TARDBP-225ENST00000621715 ARHGAP42A6NI28 874 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 DFFAO00273 331 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
TARDBP-225ENST00000621715 ETV3P41162 512 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 GNPDA1P46926 289 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 AIF1P55008 147 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 MAMLD1Q13495 774 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 DENND2CQ68D51 928 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 RFX8Q6ZV50 586 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 TSPAN33Q86UF1 283 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 ENOX1Q8TC92 643 aaKnown RBP16.73■□□□□ 0.27
TARDBP-225ENST00000621715 NUS1Q96E22 293 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 SLC25A18Q9H1K4 315 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 OCIAD1Q9NX40 245 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 PCDHB11Q9Y5F2 797 aa16.73■□□□□ 0.27
TARDBP-225ENST00000621715 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-225ENST00000621715 USP9XQ93008 2570 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 NPIPB15A6NHN6 443 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 RHPN2P1A8MT19 583 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 STMND1H3BQB6 276 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 HTRA2O43464 458 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 HEXIM1O94992 359 aaKnown RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 SOD1P00441 154 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 CR2P20023 1033 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 KELP23276 732 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 CD82P27701 267 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 UGT1A3P35503 534 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 LIMK2P53671 638 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 CDK3Q00526 305 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 CTBSQ01459 385 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 TRAF2Q12933 501 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 SKIDA1Q1XH10 827 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 ACAD10Q6JQN1 1059 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 ZNF761Q86XN6 746 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-225ENST00000621715 FNIP1Q8TF40 1166 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 ART4Q93070 314 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 SP110Q9HB58 689 aa16.72■□□□□ 0.27
TARDBP-225ENST00000621715 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms