RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SOCS7O14512 581 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC25A14O95258 325 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PRKCGP05129 697 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 APOA4P06727 396 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 FGF3P11487 239 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CNTFP26441 200 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CRY1Q16526 586 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ATP6AP1LQ52LC2 224 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MBLAC2Q68D91 279 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 UGT3A1Q6NUS8 523 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 DCLRE1AQ6PJP8 1040 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CYP2R1Q6VVX0 501 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 BNIPLQ7Z465 357 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 NPLOC4Q8TAT6 608 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ZMAT2Q96NC0 199 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CD84Q9UIB8 345 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A1W2PRU2 124 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GMFGO60234 142 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PAGE1O75459 146 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ERAL1O75616 437 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PGAM1P18669 254 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PITX1P78337 314 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CYP4F8P98187 520 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 FUT10Q6P4F1 479 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 HPS6Q86YV9 775 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TP53INP2Q8IXH6 220 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TMEM86AQ8N2M4 240 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PHC3Q8NDX5 983 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 OR14C36Q8NHC7 312 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 HDAC10Q969S8 669 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MOCOSQ96EN8 888 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 NCKIPSDQ9NZQ3 722 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CDH9Q9ULB4 789 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SNX13Q9Y5W8 968 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PTCH2Q9Y6C5 1203 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A0G2JLL6 359 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GSAPA4D1B5 854 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ARL5CA6NH57 179 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 GABBR2O75899 941 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 IFNA16P05015 189 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 LYNP07948 512 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC166P0CW27 439 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 LILRA4P59901 499 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 VAC14Q08AM6 782 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 TBL3Q12788 808 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 NFYCQ13952 458 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PCLAFQ15004 111 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MAPRE2Q15555 327 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 DLG2Q15700 870 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 NAPRTQ6XQN6 538 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 PRRT2Q7Z6L0 340 aaPredicted RBP8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SPPL2AQ8TCT8 520 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MCOLN3Q8TDD5 553 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 CMTM5Q96DZ9 223 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF778Q96MU6 729 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SH3GL3Q99963 347 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 FTHL17Q9BXU8 183 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 EBF3Q9H4W6 596 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF556Q9HAH1 456 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 MOCS1Q9NZB8 636 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 COPG2Q9UBF2 871 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 LZTS1Q9Y250 596 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 SPAG17Q6Q759 2223 aa8.3□□□□□ -1.08
PTPDC1-204ENST00000620992 IMPDH2P12268 514 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CORO1AP31146 461 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 GP5P40197 560 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 IDH3AP50213 366 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CYP4F2P78329 520 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 IRF8Q02556 426 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 TP53BP2Q13625 1128 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CACHD1Q5VU97 1274 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PPP2R2DQ66LE6 453 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SEL1L3Q68CR1 1132 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 DSG4Q86SJ6 1040 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CERS2Q96G23 380 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 TUBGCP5Q96RT8 1024 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OXCT2Q9BYC2 517 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OSBPL2Q9H1P3 480 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SNX15Q9NRS6 342 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 MORF4L1Q9UBU8 362 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ADAM28Q9UKQ2 775 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 EMCNQ9ULC0 261 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 RLFQ13129 1914 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A088AWK7 358 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 KANSL1LA0AUZ9 987 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 FKBP6O75344 327 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 C8AP07357 584 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF23P17027 643 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ATP6V1B2P21281 511 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 GRK2P25098 689 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 MSX2P35548 267 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms