RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 HNRNPKP61978 463 aaKnown RBP eCLIP16.22■□□□□ 0.19
CD40-207ENST00000620709 INSM1Q01101 510 aaPredicted RBP16.22■□□□□ 0.19
CD40-207ENST00000620709 FZD2Q14332 565 aa16.22■□□□□ 0.19
CD40-207ENST00000620709 SYDE1Q6ZW31 735 aaPredicted RBP16.22■□□□□ 0.19
CD40-207ENST00000620709 PDZD3Q86UT5 571 aa16.22■□□□□ 0.19
CD40-207ENST00000620709 ATL2Q8NHH9 583 aa16.22■□□□□ 0.19
CD40-207ENST00000620709 CXorf40AQ8TE69 158 aa16.22■□□□□ 0.19
CD40-207ENST00000620709 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
CD40-207ENST00000620709 CELF6Q96J87 481 aaKnown RBP16.22■□□□□ 0.19
CD40-207ENST00000620709 WRAP53Q9BUR4 548 aaKnown RBP16.22■□□□□ 0.19
CD40-207ENST00000620709 BHMG1C9JSJ3 638 aaPredicted RBP16.21■□□□□ 0.19
CD40-207ENST00000620709 DAPK3O43293 454 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 PIGNO95427 931 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 TGM2P21980 687 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 ZNF135P52742 658 aaPredicted RBP16.21■□□□□ 0.19
CD40-207ENST00000620709 YBEYP58557 167 aaPredicted RBP16.21■□□□□ 0.19
CD40-207ENST00000620709 E2F1Q01094 437 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 SERINC3Q13530 473 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 PARP15Q460N3 678 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 SLC9A4Q6AI14 798 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 PARGQ86W56 976 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 PAF1Q8N7H5 531 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 ACTL9Q8TC94 416 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 LMX1AQ8TE12 382 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 CASKIN2Q8WXE0 1202 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 IFT43Q96FT9 208 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 APOLD1Q96LR9 279 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 CSPG4P5Q96PW8 444 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 KLF6Q99612 283 aaPredicted RBP16.21■□□□□ 0.19
CD40-207ENST00000620709 TRIM51Q9BSJ1 452 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 C1QTNF2Q9BXJ5 285 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 NLGN3Q9NZ94 848 aa16.21■□□□□ 0.19
CD40-207ENST00000620709 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
CD40-207ENST00000620709 SPTY2D1-AS1A0A0U1RR47 76 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 EEF2KO00418 725 aaKnown RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 SCAMP1O15126 338 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 FGF10O15520 208 aaPredicted RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 SPINT1O43278 529 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 JUNDP17535 347 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 THOP1P52888 689 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 OTUD4Q01804 1114 aaKnown RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 CUL1Q13616 776 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 PPP1R7Q15435 360 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 CYTH1Q15438 398 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 TPRG1LQ5T0D9 272 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 CFAP58Q5T655 872 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 PQLC3Q8N755 202 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 EIF1ADQ8N9N8 165 aaKnown RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 ZNF548Q8NEK5 533 aaPredicted RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 PCDH19Q8TAB3 1148 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 SEC14L1Q92503 715 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 P3H4Q92791 437 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 LENG8Q96PV6 779 aaPredicted RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 ERP44Q9BS26 406 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 ABCG4Q9H172 646 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 FAM114A2Q9NRY5 505 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 CWC15Q9P013 229 aaKnown RBP16.2■□□□□ 0.18
CD40-207ENST00000620709 DNPEPQ9ULA0 475 aa16.2■□□□□ 0.18
CD40-207ENST00000620709 ESYT3A0FGR9 886 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 CPED1A4D0V7 1026 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 J3KR12 359 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 K7ESM1 405 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 TM7SF2O76062 418 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 MT-CO3P00414 261 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 CSF2P04141 144 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 TIMP2P16035 220 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 NOMO1Q15155 1222 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 OASLQ15646 514 aaKnown RBP16.19■□□□□ 0.18
CD40-207ENST00000620709 DEFB133Q30KQ1 61 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 UMODL1-AS1Q8N2C9 162 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 PLD5Q8N7P1 536 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 SLC35B2Q8TB61 432 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 C1QTNF7Q9BXJ2 289 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 EVA1BQ9NVM1 165 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 LHX3Q9UBR4 397 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 KLF15Q9UIH9 416 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 DRG1Q9Y295 367 aaKnown RBP16.19■□□□□ 0.18
CD40-207ENST00000620709 COQ6Q9Y2Z9 468 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 WASH4PA8MWX3 477 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 AQP9O43315 295 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 GIMD1P0DJR0 217 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 CKMT1AP12532 417 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 NME1P15531 152 aaKnown RBP16.19■□□□□ 0.18
CD40-207ENST00000620709 PECAM1P16284 738 aaPredicted RBP16.19■□□□□ 0.18
CD40-207ENST00000620709 IGFALSP35858 605 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 DUSP3P51452 185 aaPredicted RBP16.19■□□□□ 0.18
CD40-207ENST00000620709 C1orf61Q13536 156 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 PTK6Q13882 451 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 DUPD1Q68J44 220 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 RBFAQ8N0V3 343 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 DENND6BQ8NEG7 585 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.19■□□□□ 0.18
CD40-207ENST00000620709 DUSP23Q9BVJ7 150 aa16.19■□□□□ 0.18
CD40-207ENST00000620709 ARHGAP42A6NI28 874 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms