RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ZNF599Q96NL3 588 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 MXRA8Q9BRK3 442 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 PYGO2Q9BRQ0 406 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 SLC32A1Q9H598 525 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 ESRP2Q9H6T0 727 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 MKKSQ9NPJ1 570 aaPredicted RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 DDX4Q9NQI0 724 aaKnown RBP2.8□□□□□ -1.96
TARDBP-220ENST00000618606 TMEM160Q9NX00 188 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 PADI1Q9ULC6 663 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 DNAJC16Q9Y2G8 782 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 GDAQ9Y2T3 454 aa2.8□□□□□ -1.96
TARDBP-220ENST00000618606 SH2D7A6NKC9 451 aaPredicted RBP2.79□□□□□ -1.96
TARDBP-220ENST00000618606 PER2O15055 1255 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 ANP32CO43423 234 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 PCDH7O60245 1069 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 MMP2P08253 660 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 NR1D1P20393 614 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 AGAP20933 346 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 MMP14P50281 582 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 CLCNKAP51800 687 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 ACTR2P61160 394 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 CHRNDQ07001 517 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 KRT72Q14CN4 511 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 MMEL1Q495T6 779 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 SGO1Q5FBB7 561 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 PDSS1Q5T2R2 415 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 SLC27A1Q6PCB7 646 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 CEACAM20Q6UY09 585 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 KCTD8Q6ZWB6 473 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 TAOK1Q7L7X3 1001 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 KIAA2013Q8IYS2 634 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 TMEM57Q8N5G2 664 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 TRIM58Q8NG06 486 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 DUSP19Q8WTR2 217 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 RUBCNQ92622 972 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 ZC3HAV1LQ96H79 300 aaKnown RBP2.79□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF570Q96NI8 536 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF700Q9H0M5 742 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 KIF17Q9P2E2 1029 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 RCOR1Q9UKL0 485 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 SUFUQ9UMX1 484 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 COMMD10Q9Y6G5 202 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 PRSS21Q9Y6M0 314 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 STON1Q9Y6Q2 735 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 KIAA1210Q9ULL0 1709 aa2.79□□□□□ -1.96
TARDBP-220ENST00000618606 A0A1W2PNU3 283 aaPredicted RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 CTAGE9A4FU28 777 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 KRTAP16-1A8MUX0 517 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 BLOC1S5-TXNDC5H3BN57 136 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 CREB3O43889 395 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 EIF3JO75822 258 aaKnown RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 INHBAP08476 426 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 CTAGE8P0CG41 777 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 ETFAP13804 333 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 MYOD1P15172 320 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 DDIT3P35638 169 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 DCTP40126 519 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 HOXA1P49639 335 aaPredicted RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 HNRNPH2P55795 449 aaKnown RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 EEF1A1P68104 462 aaKnown RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 BRD3Q15059 726 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 LPAL2Q16609 132 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 STXBP5Q5T5C0 1151 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 C10orf62Q5T681 223 aaPredicted RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 EEF1A1P5Q5VTE0 462 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 RGMBQ6NW40 437 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 ASB18Q6ZVZ8 466 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 NOXA1Q86UR1 476 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 CTAGE4Q8IX94 777 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 FBXL8Q96CD0 374 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 ZNF583Q96ND8 569 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 ARPC5LQ9BPX5 153 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 STN1Q9H668 368 aaKnown RBP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 EPHX3Q9H6B9 360 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 CARD8Q9Y2G2 431 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.78□□□□□ -1.96
TARDBP-220ENST00000618606 AMDHD2Q9Y303 409 aa2.78□□□□□ -1.96
TARDBP-220ENST00000618606 IGKV6D-41A0A0C4DH26 115 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 B9A039 149 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 DVL1O14640 695 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 WEE2P0C1S8 567 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 DDX5P17844 614 aaKnown RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 RRM1P23921 792 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 CORO1AP31146 461 aaKnown RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GNL1P36915 607 aaPredicted RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 EIF2S3P41091 472 aaKnown RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 LUMP51884 338 aaPredicted RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 TERF1P54274 439 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 DVL1P1P54792 670 aaPredicted RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GNB1P62873 340 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GAGE5Q13069 117 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GAGE6Q13070 117 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GTF2H2Q13888 395 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GPATCH4Q5T3I0 446 aaKnown RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 GTF2H2CQ6P1K8 395 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 SLC36A4Q6YBV0 504 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
TARDBP-220ENST00000618606 LINGO2Q7L985 606 aa2.77□□□□□ -1.97
TARDBP-220ENST00000618606 FAM160B2Q86V87 743 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms