RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ABCG1P45844 678 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 EPHB1P54762 984 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 GSDMDP57764 484 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 HNRNPKP61978 463 aaKnown RBP eCLIP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 YPEL5P62699 121 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 ADCY2Q08462 1091 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 MTM1Q13496 603 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 IHHQ14623 411 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 AGERQ15109 404 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 PPP2R5EQ16537 467 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 TSPAN33Q86UF1 283 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 RBFAQ8N0V3 343 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 ZNF548Q8NEK5 533 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 LPCAT1Q8NF37 534 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 NUS1Q96E22 293 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 MCCC1Q96RQ3 725 aaPredicted RBP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.16
BRCA1-228ENST00000618469 CHKBQ9Y259 395 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 OR1A2Q9Y585 309 aa16.02■□□□□ 0.16
BRCA1-228ENST00000618469 A0A087WV48 116 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 TOR1BO14657 336 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 CSF2P04141 144 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 JUNDP17535 347 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 NR2C2P49116 596 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 EIF2B5Q13144 721 aaKnown RBP16.01■□□□□ 0.15
BRCA1-228ENST00000618469 DNAJC3Q13217 504 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 ARHGEF7Q14155 803 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 INPP5AQ14642 412 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 NFATC4Q14934 902 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-228ENST00000618469 PTPRRQ15256 657 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
BRCA1-228ENST00000618469 PHACTR4Q8IZ21 702 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 NDUFAF2Q8N183 169 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 SLC25A45Q8N413 288 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 CNTD1Q8N815 330 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 PLA2G15Q8NCC3 412 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 TFB1MQ8WVM0 346 aaKnown RBP16.01■□□□□ 0.15
BRCA1-228ENST00000618469 P3H4Q92791 437 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 AGAP3Q96P47 875 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 HEMGNQ9BXL5 484 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 BRD8Q9H0E9 1235 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 PCDH9Q9HC56 1237 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 DKK4Q9UBT3 224 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 APOBEC3BQ9UH17 382 aaKnown RBP16.01■□□□□ 0.15
BRCA1-228ENST00000618469 KLF15Q9UIH9 416 aa16.01■□□□□ 0.15
BRCA1-228ENST00000618469 MYLKQ15746 1914 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 A0A0J9YYE9 177 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 CCDC66A2RUB6 948 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 CAPN8A6NHC0 703 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 TRIM38O00635 465 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 SIGLEC6O43699 453 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 TRBC1P01850 177 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 MMP2P08253 660 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 CTNNA2P26232 953 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 HTR1BP28222 390 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 CCDC181Q5TID7 509 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 LRRC66Q68CR7 880 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 BBS12Q6ZW61 710 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 HSD11B1LQ7Z5J1 315 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 ZC3H18Q86VM9 953 aaKnown RBP16■□□□□ 0.15
BRCA1-228ENST00000618469 OR4C6Q8NH72 309 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 DTD2Q96FN9 168 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 SCRN2Q96FV2 425 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 UBL7Q96S82 380 aaPredicted RBP16■□□□□ 0.15
BRCA1-228ENST00000618469 APOOQ9BUR5 198 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 TCEAL2Q9H3H9 227 aaPredicted RBP16■□□□□ 0.15
BRCA1-228ENST00000618469 PNMA8BQ9ULN7 279 aaPredicted RBP16■□□□□ 0.15
BRCA1-228ENST00000618469 PCDHA3Q9Y5H8 950 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 KNTC1P50748 2209 aa16■□□□□ 0.15
BRCA1-228ENST00000618469 A0A0U1RQS6 177 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 GOLGA6CA6NDK9 693 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 GOLGA6BA6NDN3 693 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PSMD11O00231 422 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 AQP9O43315 295 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 DKK1O94907 266 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 GOLGA6DP0CG33 693 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 ALPPL2P10696 532 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PLA2G2AP14555 144 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PTPN3P26045 913 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 HNF1BP35680 557 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 EIF2S3P41091 472 aaKnown RBP15.99■□□□□ 0.15
BRCA1-228ENST00000618469 ETV3P41162 512 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 ACADVLP49748 655 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PEX5P50542 639 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 RWDD2BP57060 319 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 SKOR1P84550 965 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 GALNT3Q14435 633 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PRRT3Q5FWE3 981 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 ESRP1Q6NXG1 681 aaKnown RBP15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PEX26Q7Z412 305 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 NT5DC3Q86UY8 548 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 SYCE1Q8N0S2 351 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms