RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MFAP3P55082 362 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 PLK5Q496M5 336 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 RAB6CQ53S08 254 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 FAM133BQ5BKY9 247 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 OTUD1Q5VV17 481 aaPredicted RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 SYPL2Q5VXT5 272 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 C1orf228Q6PIY5 440 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 MMS22LQ6ZRQ5 1243 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 RSRC2Q7L4I2 434 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 C1QL2Q7Z5L3 287 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 SLC47A2Q86VL8 602 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 RASSF3Q86WH2 238 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 CXorf67Q86X51 503 aaPredicted RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 DDX42Q86XP3 938 aaKnown RBP eCLIP4.74□□□□□ -1.65
CUL3-216ENST00000617432 SIX6OS1Q8N1H7 587 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 SYNPOQ8N3V7 929 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 TRIML1Q8N9V2 468 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 C1orf131Q8NDD1 294 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 TSTD1Q8NFU3 115 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 DQX1Q8TE96 717 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 HMGB4Q8WW32 186 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 GAB3Q8WWW8 586 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 CPXM1Q96SM3 734 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 LSM14BQ9BX40 385 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 C1QTNF7Q9BXJ2 289 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 RAB6CQ9H0N0 254 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 ANLNQ9NQW6 1124 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 SEMA4GQ9NTN9 838 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 BCCIPQ9P287 314 aaKnown RBP eCLIP4.74□□□□□ -1.65
CUL3-216ENST00000617432 HESX1Q9UBX0 185 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 PFDN2Q9UHV9 154 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 CNTN6Q9UQ52 1028 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 SNX10Q9Y5X0 201 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 SLCO1B1Q9Y6L6 691 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 GVINP1Q7Z2Y8 2422 aa4.74□□□□□ -1.65
CUL3-216ENST00000617432 TNRC6BQ9UPQ9 1833 aaKnown RBP4.74□□□□□ -1.65
CUL3-216ENST00000617432 SYNJ2BP-COX16A0A087WUM0 186 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 KCNJ18B7U540 433 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 I6L893 689 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 FOXN3O00409 490 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 SLC9A3R1O14745 358 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 P4HA2O15460 535 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 SCAF4O95104 1147 aaKnown RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 EPN2O95208 641 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 MOCS2O96007 188 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 PENKP01210 267 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 IGLV3-27P01718 113 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 RALAP11233 206 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 HOXB2P14652 356 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 GYPEP15421 78 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 HLA-FP30511 346 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 SDHAP31040 664 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 CXCR5P32302 372 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 CD70P32970 193 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 EIF2DP41214 584 aaKnown RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 PPP1R2P41236 205 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 PTGER3P43115 390 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 YWHAEP62258 255 aaKnown RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 GCNT1Q02742 428 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 PDCLQ13371 301 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 KCNJ12Q14500 433 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 CNGA2Q16280 664 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 MAN2A1Q16706 1144 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FBXO43Q4G163 708 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 PTPN20Q4JDL3 420 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 TAF3Q5VWG9 929 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FOXB2Q5VYV0 432 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 TRNP1Q6NT89 227 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 MSANTD2Q6P1R3 559 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FOXR2Q6PJQ5 311 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FAM183BPQ6ZVS7 135 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 PHLDB2Q86SQ0 1253 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 DNAAF5Q86Y56 855 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FAM217AQ8IXS0 508 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 CFAP52Q8N1V2 620 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 OR2I1PQ8NGU4 316 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 OLIG1Q8TAK6 271 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 SLC20A1Q8WUM9 679 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 ZNF606Q8WXB4 792 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 SHC3Q92529 594 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 ARL8AQ96BM9 186 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FAXDC2Q96IV6 333 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 FAM126AQ9BYI3 521 aaPredicted RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 UBXN6Q9BZV1 441 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 VPS16Q9H269 839 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 HSD3B7Q9H2F3 369 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 TMEM74BQ9NUR3 256 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 CLIC5Q9NZA1 410 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 COX16Q9P0S2 106 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 TBC1D14Q9P2M4 693 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 DEC1Q9P2X7 70 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 LSM7Q9UK45 103 aaKnown RBP4.73□□□□□ -1.65
CUL3-216ENST00000617432 DNAJC12Q9UKB3 198 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 GMEB2Q9UKD1 530 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 COQ6Q9Y2Z9 468 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 NFE2L3Q9Y4A8 694 aa4.73□□□□□ -1.65
CUL3-216ENST00000617432 ZNF292O60281 2723 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms