RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 CLIC5Q9NZA1 410 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 TXNDC16Q9P2K2 825 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 RAP2CQ9Y3L5 183 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 HEY1Q9Y5J3 304 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 INSL5Q9Y5Q6 135 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 AP4B1Q9Y6B7 739 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 AK5Q9Y6K8 562 aa11.15□□□□□ -0.62
RABGAP1-213ENST00000616002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 CAPN8A6NHC0 703 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ERI2A8K979 691 aaKnown RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 MATN2O00339 956 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 SYN3O14994 580 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 HDAC3O15379 428 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TIMM44O43615 452 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 LRP3O75074 770 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 PDE5AO76074 875 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 RETP07949 1114 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ADRB1P08588 477 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 COL6A2P12110 1019 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TDGF1P13385 188 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ZNF23P17027 643 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ME2P23368 584 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 SERPINB5P36952 375 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 CCR2P41597 374 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 RANBP1P43487 201 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 CXCL12P48061 93 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 CSRP3P50461 194 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 OSTNP61366 133 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 SOX4Q06945 474 aaPredicted RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TRAP1Q12931 704 aaKnown RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 MTM1Q13496 603 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 SIM2Q14190 667 aaPredicted RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 OCLNQ16625 522 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 SEZ6Q53EL9 994 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 PPM1JQ5JR12 505 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TPGS2Q68CL5 300 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 VITQ6UXI7 678 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 DSELQ8IZU8 1212 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 MPP5Q8N3R9 675 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ZFP28Q8NHY6 868 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 HTR3CQ8WXA8 447 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 GCNAQ96QF7 691 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 RBBP8Q99708 897 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 IL22Q9GZX6 179 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 DRC3Q9H069 523 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 EFCAB1Q9HAE3 211 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 UBAP1Q9NZ09 502 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TMEM216Q9P0N5 145 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 RPS6KL1Q9Y6S9 549 aa11.14□□□□□ -0.63
RABGAP1-213ENST00000616002 TICRRQ7Z2Z1 1910 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 G3V2L1 256 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 TXNDC9O14530 226 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 SLC30A4O14863 429 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ZBTB14O43829 449 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 SEC24AO95486 1093 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 HSPA4LO95757 839 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 C8BP07358 591 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 PIK3R1P27986 724 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 VIPR2P41587 438 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 GRM5P41594 1212 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 MAGEA8P43361 318 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ALDH3B2P48448 385 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 CDK9P50750 372 aaKnown RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 LIMK2P53671 638 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 MYBPC1Q00872 1141 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 SFSWAPQ12872 951 aaKnown RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 FLOT2Q14254 428 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 CTXN3Q4LDR2 81 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 C16orf46Q6P387 395 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 STRADAQ7RTN6 431 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 LEMD2Q8NC56 503 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ZSCAN18Q8TBC5 510 aaPredicted RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 HM13Q8TCT9 377 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 NMD3Q96D46 503 aaKnown RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ZNF597Q96LX8 424 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 HEXIM2Q96MH2 286 aaKnown RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ZSWIM3Q96MP5 696 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 LENG8Q96PV6 779 aaPredicted RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 OSBPL11Q9BXB4 747 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 NT5C1AQ9BXI3 368 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 ASAH2Q9NR71 780 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 OXSMQ9NWU1 459 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 PTBP2Q9UKA9 531 aaKnown RBP11.13□□□□□ -0.63
RABGAP1-213ENST00000616002 TRIM64CA6NLI5 447 aa11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 NRG2O14511 850 aaPredicted RBP11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 TRMUO75648 421 aaKnown RBP11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 CDK4P11802 303 aa11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 CPB1P15086 417 aa11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 PPARGP37231 505 aaPredicted RBP11.12□□□□□ -0.63
RABGAP1-213ENST00000616002 CDH8P55286 799 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms