RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PARGQ86W56 976 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 EID2Q8N6I1 236 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 TADA1Q96BN2 335 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 TRIB3Q96RU7 358 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 YKT6O15498 198 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 PMPCBO75439 489 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 RBP3P10745 1247 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 CA4P22748 312 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 DGKAP23743 735 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 EIF3EP60228 445 aaKnown RBP16.74■□□□□ 0.27
CBWD3-211ENST00000615061 YPEL5P62699 121 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-211ENST00000615061 XRCC4Q13426 336 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 KCTD16Q68DU8 428 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 PID1Q7Z2X4 250 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 RBFAQ8N0V3 343 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 NUS1Q96E22 293 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 APOOQ9BUR5 198 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 KCNF1Q9H3M0 494 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 R3HDM2Q9Y2K5 976 aaKnown RBP16.74■□□□□ 0.27
CBWD3-211ENST00000615061 ANKRD66B4E2M5 251 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 MTSS1O43312 755 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 PIAS2O75928 621 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 CLDN7O95471 211 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
CBWD3-211ENST00000615061 CSF2P04141 144 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 PTMAP06454 111 aaKnown RBP16.73■□□□□ 0.27
CBWD3-211ENST00000615061 C1SP09871 688 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 PIRTP0C851 137 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 IGF2RP11717 2491 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 NME1P15531 152 aaKnown RBP16.73■□□□□ 0.27
CBWD3-211ENST00000615061 NFKBIAP25963 317 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 MTM1Q13496 603 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 NDUFAF2Q8N183 169 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 PNPLA1Q8N8W4 532 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 DTD2Q96FN9 168 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 OXNAD1Q96HP4 312 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-211ENST00000615061 LGR4Q9BXB1 951 aa16.73■□□□□ 0.27
CBWD3-211ENST00000615061 ARHGEF17Q96PE2 2063 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-211ENST00000615061 SCAMP1O15126 338 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 NRDCO43847 1150 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 ATXN1LP0C7T5 689 aaKnown RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 GIMD1P0DJR0 217 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 JUNDP17535 347 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 CDK18Q07002 472 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 CDKN3Q16667 212 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 MEI1Q5TIA1 1274 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 ESRP1Q6NXG1 681 aaKnown RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 DARS2Q6PI48 645 aaKnown RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 MACC1Q6ZN28 852 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 TECPR1Q7Z6L1 1165 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 IFT43Q96FT9 208 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 MLPHQ9BV36 600 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 TOR4AQ9NXH8 423 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 BPTFQ12830 3046 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 COL5A1P20908 1838 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 FREM2Q5SZK8 3169 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 PSMD11O00231 422 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 TRIM38O00635 465 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 FFAR2O15552 330 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 KCNN4O15554 427 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 FTH1P19P0C7X4 201 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 PTK2BQ14289 1009 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 TCEA2Q15560 299 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 PNCKQ6P2M8 343 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 ENPP7Q6UWV6 458 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 SLCO6A1Q86UG4 719 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 CDKL3Q8IVW4 592 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 SCAMP4Q969E2 229 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 TSACCQ96A04 125 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-211ENST00000615061 EID2BQ96D98 161 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 LYSMD1Q96S90 227 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 VAT1Q99536 393 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 GORASP1Q9BQQ3 440 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 ADGRE3Q9BY15 652 aa16.72■□□□□ 0.27
CBWD3-211ENST00000615061 RP1P56715 2156 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 C1orf232A0A0U1RR37 186 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 GOLGA6CA6NDK9 693 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 GOLGA6BA6NDN3 693 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 TMEM202A6NGA9 273 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 GOLGA6DP0CG33 693 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 TRIM23P36406 574 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 STC1P52823 247 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 HNRNPKP61978 463 aaKnown RBP eCLIP16.71■□□□□ 0.27
CBWD3-211ENST00000615061 FOXC1Q12948 553 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 DNAJC3Q13217 504 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 C1orf61Q13536 156 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 NFATC4Q14934 902 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 RPS6KA1Q15418 735 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 INAVAQ3KP66 663 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 KDELC1Q6UW63 502 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 PHACTR4Q8IZ21 702 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 ZNF548Q8NEK5 533 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-211ENST00000615061 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 MRGPRX2Q96LB1 330 aa16.71■□□□□ 0.27
CBWD3-211ENST00000615061 ALS2CR12Q96Q35 445 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms