RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PLXNA3P51805 1871 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 C1orf232A0A0U1RR37 186 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 E9PBE3 544 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 FCHO1O14526 889 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ZBTB14O43829 449 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 KLHL41O60662 606 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TRIM13O60858 407 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CLASP2O75122 1294 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 NIPSNAP2O75323 286 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NDUFS3O75489 264 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 RPP40O75818 363 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 ZNF189O75820 626 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 SRP72O76094 671 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 RHOBTB1O94844 696 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CRTAMO95727 393 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 OLFM2O95897 454 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SERPINE1P05121 402 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MPOP05164 745 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CD1EP15812 388 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TFEBP19484 476 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CHRM3P20309 590 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MAGEA9P43362 315 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ABCE1P61221 599 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 BCL2L1Q07817 233 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TNK2Q07912 1038 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NSUN2Q08J23 767 aaKnown RBP eCLIP3.44□□□□□ -1.86
LIG4-205ENST00000614526 NAB1Q13506 487 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PDCD2Q16342 344 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 PTPRNQ16849 979 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 FUT11Q495W5 492 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MPPE1Q53F39 396 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PITRM1Q5JRX3 1037 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CFAP157Q5JU67 520 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 RNF43Q68DV7 783 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NXNQ6DKJ4 435 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 RETSATQ6NUM9 610 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 NCEH1Q6PIU2 408 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 HTR3DQ70Z44 454 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CLNKQ7Z7G1 428 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ZSWIM9Q86XI8 627 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SFTPA1Q8IWL2 248 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 KLHDC8BQ8IXV7 354 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 POU5F2Q8N7G0 328 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SNX31Q8N9S9 440 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CHST14Q8NCH0 376 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ZNF599Q96NL3 588 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SORT1Q99523 831 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 C1QTNF1Q9BXJ1 281 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 RASSF4Q9H2L5 321 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 EBF3Q9H4W6 596 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SLC40A1Q9NP59 571 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 THAP1Q9NVV9 213 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 KIAA1522Q9P206 1035 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 BAIAP2L1Q9UHR4 511 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SSX2IPQ9Y2D8 614 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 YBX2Q9Y2T7 364 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 PPP6CO00743 305 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SLC7A4O43246 635 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SKAP2O75563 359 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 SIX3O95343 332 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 JUNP05412 331 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 KRT16P08779 473 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SRCP12931 536 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 LPOP22079 712 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 EPHA3P29320 983 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 LEPRP48357 1165 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 SLC7A9P82251 487 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 BNIP1Q12981 228 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PDAP1Q13442 181 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 GEN1Q17RS7 908 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CCDC153Q494R4 210 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ARHGAP15Q53QZ3 475 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 ARL13AQ5H913 290 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 TMEM215Q68D42 235 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MRNIPQ6NTE8 343 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PAQR3Q6TCH7 311 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 DPY19L3Q6ZPD9 716 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 YTHDF3Q7Z739 585 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 UBE2Q1Q7Z7E8 422 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SDCCAG8Q86SQ7 713 aaPredicted RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 CLEC14AQ86T13 490 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PACS2Q86VP3 889 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 WDR75Q8IWA0 830 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 TRIM42Q8IWZ5 723 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TMEM151AQ8N4L1 468 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 EFCAB3Q8N7B9 438 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 DCBLD1Q8N8Z6 715 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TXNDC5Q8NBS9 432 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 FBXO27Q8NI29 283 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PIWIL2Q8TC59 973 aaKnown RBP3.44□□□□□ -1.86
LIG4-205ENST00000614526 MAPK15Q8TD08 544 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CALML6Q8TD86 181 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 HERVK_113Q902F9 699 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 TADA1Q96BN2 335 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 CEP295NLQ96MC4 621 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 PPP1R2P1Q96PQ5 205 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 SLC30A3Q99726 388 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 MCMBPQ9BTE3 642 aa3.44□□□□□ -1.86
LIG4-205ENST00000614526 BOCQ9BWV1 1114 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms