RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 AMIGO2Q86SJ2 522 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 STK40Q8N2I9 435 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 KDM1BQ8NB78 822 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 NSMCE2Q96MF7 247 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 BTRCQ9Y297 605 aa6.39□□□□□ -1.39
SNX13-213ENST00000611725 DEAF1O75398 565 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 CHRM1P11229 460 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 SELPP16109 830 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 DNAJB1P25685 340 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 KCNQ1P51787 676 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CHRNB3Q05901 458 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MORN1Q5T089 497 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ADAMTSL2Q86TH1 951 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CAMK1DQ8IU85 385 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ZNF786Q8N393 782 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 GPR21Q99679 349 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 OXCT2Q9BYC2 517 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 FLRT1Q9NZU1 646 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MTF2Q9Y483 593 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 A0A1B0GVM2 712 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 STX16-NPEPL1H3BU86 382 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 AURKAO14965 403 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 VPS4BO75351 444 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 PAPSS2O95340 614 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 SIX3O95343 332 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 KRT6AP02538 564 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 KRT6BP04259 564 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ITGB1P05556 798 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 KRT6CP48668 564 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 RPL34P49207 117 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 PLOD1Q02809 727 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 USP41Q3LFD5 358 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 PRMT9Q6P2P2 845 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 DNAJC14Q6Y2X3 702 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 SCD5Q86SK9 330 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CIR1Q86X95 450 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 OR13C4Q8NGS5 318 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 LPGAT1Q92604 370 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MOCOSQ96EN8 888 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CDKN2AIPNLQ96HQ2 116 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 HGH1Q9BTY7 390 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 NME7Q9Y5B8 376 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SLC4A7Q9Y6M7 1214 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNX13-213ENST00000611725 FCGR1AP12314 374 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CES1P23141 567 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MAGEA11P43364 429 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CEACAM7Q14002 265 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 TSNQ15631 228 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 NRF1Q16656 503 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 FBXO48Q5FWF7 155 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 RAB41Q5JT25 222 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SCIMPQ6UWF3 145 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 GPSM1Q86YR5 675 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ZNF276Q8N554 614 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 DCBLD1Q8N8Z6 715 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 NMD3Q96D46 503 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 DCUN1D1Q96GG9 259 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ACOX2Q99424 681 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SORT1Q99523 831 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 FBRSL1Q9HCM7 1045 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 TMEM30AQ9NV96 361 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 EIF3LQ9Y262 564 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 CCDC162PA2VCL2 907 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 C9JVG2 144 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MAFKO60675 156 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 HDCP19113 662 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 MAPK8P45983 427 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ADAM17P78536 824 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 FUT11Q495W5 492 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CACHD1Q5VU97 1274 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CLEC4FQ8N1N0 589 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 PNPLA1Q8N8W4 532 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SNX31Q8N9S9 440 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ACVR1CQ8NER5 493 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 IMP4Q96G21 291 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 B3GALT6Q96L58 329 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 SEPHS2Q99611 448 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ELOVL6Q9H5J4 265 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CCSER2Q9H7U1 834 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ZDHHC2Q9UIJ5 367 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ORC6Q9Y5N6 252 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ZNF839A8K0R7 811 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 G3V2L1 256 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 M0QZQ0 153 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CLOCKO15516 846 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 OAZ2O95190 189 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 LDLRP01130 860 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 NAA20P61599 178 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CBLBQ13191 982 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 DDX39BQ13838 428 aaKnown RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 MS4A13Q5J8X5 152 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 OTUD1Q5VV17 481 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 LRRC8DQ7L1W4 858 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 ARHGAP12Q8IWW6 846 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 CENPLQ8N0S6 344 aaPredicted RBP6.38□□□□□ -1.39
SNX13-213ENST00000611725 OSCP1Q8WVF1 389 aa6.38□□□□□ -1.39
SNX13-213ENST00000611725 TRAPPC9Q96Q05 1148 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms