RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 LHFPL5Q8TAF8 219 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 DYNC2LI1Q8TCX1 351 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 MUL1Q969V5 352 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 MRPL40Q9NQ50 206 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 HSPBP1Q9NZL4 362 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 SNX6Q9UNH7 406 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 FIS1Q9Y3D6 152 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 HES2Q9Y543 173 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 DDTLA6NHG4 134 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 C16orf96A6NNT2 1141 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 SLITRK5O94991 958 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 LIG4P49917 911 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 MAPK12P53778 367 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 NDUFAF5Q5TEU4 345 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 REP15Q6BDI9 236 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 DPY19L3Q6ZPD9 716 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 PLD3Q8IV08 490 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 PLD6Q8N2A8 252 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 XXYLT1Q8NBI6 393 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 NSUN6Q8TEA1 469 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 PHF10Q8WUB8 498 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 RPL3LQ92901 407 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 CEP170P1Q96L14 293 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 GMLQ99445 158 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ASPSCR1Q9BZE9 553 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
CTCFL-218ENST00000608440 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ENTPD7Q9NQZ7 604 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 TLK1Q9UKI8 766 aa12.59□□□□□ -0.39
CTCFL-218ENST00000608440 ZNFX1Q9P2E3 1918 aaKnown RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 FAM159BA6NKW6 160 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 AGXTP21549 392 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF76P36508 570 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SOX9P48436 509 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GALNT3Q14435 633 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SPRED1Q7Z699 444 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 FAR1Q8WVX9 515 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 DUS3LQ96G46 650 aaKnown RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 RNF170Q96K19 258 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 ASB2Q96Q27 587 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PIH1D1Q9NWS0 290 aaKnown RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PSAT1Q9Y617 370 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 F5H423 210 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 LINC01387J3KSC0 135 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GRID2O43424 1007 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GABARAPO95166 117 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PIGNO95427 931 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PDGFAP04085 211 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 TFEBP19484 476 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PROZP22891 400 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PSMA4P25789 261 aaKnown RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SHMT1P34896 483 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 DDOSTP39656 456 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 CRADDP78560 199 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 CD83Q01151 205 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 KRT39Q6A163 491 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 CASC4Q6P4E1 433 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SYCE2Q6PIF2 218 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 LURAP1LQ8IV03 231 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GALNT11Q8NCW6 608 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 OR10Z1Q8NGY1 313 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 CYP2W1Q8TAV3 490 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 BCL7CQ8WUZ0 217 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SEPT1Q8WYJ6 367 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 MSANTD3Q96H12 275 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 NEDD4LQ96PU5 975 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF385DQ9H6B1 395 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SLC35C2Q9NQQ7 365 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.4
CTCFL-218ENST00000608440 EXD2Q9NVH0 621 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 TAS2R9Q9NYW1 312 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 CD300AQ9UGN4 299 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 ZDHHC2Q9UIJ5 367 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 FBXO5Q9UKT4 447 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 SNX7Q9UNH6 387 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 PCDHB3Q9Y5E6 796 aa12.58□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM233B4DJY2 109 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
CTCFL-218ENST00000608440 I3L521 148 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms