RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NEK7Q8TDX7 302 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 DNAJB3Q8WWF6 145 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 C1GALT1C1Q96EU7 318 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CDH19Q9H159 772 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 LRRC19Q9H756 370 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 LYPLA1O75608 230 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SEPHS1P49903 392 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CEBPGP53567 150 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SEC23AQ15436 765 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 MPPE1Q53F39 396 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 NAT14Q8WUY8 206 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 BHLHE41Q9C0J9 482 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ABCC13Q9NSE7 274 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 INTS7Q9NVH2 962 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RBMX2Q9Y388 322 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 E7ENX8 843 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RFXANKO14593 260 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 RECQL4O94761 1208 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 CBX5P45973 191 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SNRPD1P62314 119 aaKnown RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 TIGD2Q4W5G0 525 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 C11orf24Q96F05 449 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-217ENST00000602723 SPATC1LQ9H0A9 340 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 PNPLA8Q9NP80 782 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 GIT1Q9Y2X7 761 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 FADS3Q9Y5Q0 445 aa9.62□□□□□ -0.87
CSMD1-217ENST00000602723 MAGEB3O15480 346 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CHP2O43745 196 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ALDH2P05091 517 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TSPAN8P19075 237 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 GJA8P48165 433 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CDH4P55283 916 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SWI5Q1ZZU3 235 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 AAGABQ6PD74 315 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PIGKQ92643 395 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CCDC115Q96NT0 180 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SP140LQ9H930 580 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ADGRE2Q9UHX3 823 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 OAS3Q9Y6K5 1087 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 A0A1W2PQ72 361 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CDC40O60508 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 NOS1APO75052 506 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 METTL18O95568 372 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PTPN1P18031 435 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 USP4Q13107 963 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ANXA8L1Q5VT79 327 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 DEFB128Q7Z7B8 93 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 RASAL3Q86YV0 1011 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ASB8Q9H765 288 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ESPL1Q14674 2120 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TP73O15350 636 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TRBC1P01850 177 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TAL1P17542 331 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PSMA1P25786 263 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ABL2P42684 1182 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 MAPK8P45983 427 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CCSAPQ6IQ19 270 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 GSTCDQ8NEC7 633 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 OMDQ99983 421 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF670Q9BS34 389 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNHIT2Q9UHR6 403 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ABHD14A-ACY1A0A1B0GW23 586 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 FAM86C2PA6NEL3 165 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 IGFBP5P24593 272 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 KLRC2P26717 231 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 AXLP30530 894 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CYP2C18P33260 490 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 RUNDC3AQ59EK9 446 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 FAM71AQ8IYT1 594 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TNFAIP8L1Q8WVP5 186 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TGDSO95455 350 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 LYNP07948 512 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 POU5F1Q01860 360 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PDPRQ8NCN5 879 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 S100A14Q9HCY8 104 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 MNDAP41218 407 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 DRG2P55039 364 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PPP2R2BQ00005 443 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 RGS1Q08116 209 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ITGA7Q13683 1181 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 GRB14Q14449 540 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZC3H12AQ5D1E8 599 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF730Q6ZMV8 503 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF248Q8NDW4 579 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 LINGO1Q96FE5 620 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF780BQ9Y6R6 833 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 CHST10O43529 356 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TOP3BO95985 862 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SCN1BQ07699 218 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 PTPRNQ16849 979 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 RAET1GQ6H3X3 334 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SLC34A3Q8N130 599 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms