RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TMEM35BQ8NCS4 154 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 GPR156Q8NFN8 814 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SLC30A5Q8TAD4 765 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SPPL3Q8TCT6 385 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 IGDCC4Q8TDY8 1250 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ASB12Q8WXK4 309 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PHKBQ93100 1093 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CPNE4Q96A23 557 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 DCPSQ96C86 337 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CSPG4P5Q96PW8 444 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TCF25Q9BQ70 676 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 NMUR2Q9GZQ4 415 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 KCNH6Q9H252 994 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RHBGQ9H310 441 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PIGUQ9H490 435 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 GAREM1Q9H706 876 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SNX15Q9NRS6 342 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 GDE1Q9NZC3 331 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CTSFQ9UBX1 484 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 NAALADL1Q9UQQ1 740 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RUVBL1Q9Y265 456 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 MFHAS1Q9Y4C4 1052 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PCDHAC2Q9Y5I4 1007 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TAF6LQ9Y6J9 622 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ATAD5Q96QE3 1844 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TUBAL3A6NHL2 446 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FAM170BA6NMN3 283 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FPGTO14772 594 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 KLF11O14901 512 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ANGPT2O15123 496 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CA12O43570 354 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 AKAP8O43823 692 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HUS1O60921 280 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 GGPS1O95749 300 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PTBP3O95758 552 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 IL33O95760 270 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 IGHV2-70P01814 119 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 APOA1P02647 267 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SERPINA6P08185 405 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 RBP1P09455 135 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CTSHP09668 335 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 H2AFB1P0C5Y9 115 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 H2AFB2P0C5Z0 115 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 BMP4P12644 408 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MYF6P23409 242 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ACTR1BP42025 376 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 RPL35P42766 123 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SLC7A2P52569 658 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 OR2B6P58173 313 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TAS2R60P59551 318 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CAV1Q03135 178 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FUT2Q10981 343 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 NME3Q13232 169 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 GRM1Q13255 1194 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TAB1Q15750 504 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HLFQ16534 295 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HIST2H2ACQ16777 129 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TUSC1Q2TAM9 212 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MINDY4Q4G0A6 757 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MANEALQ5VSG8 457 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FAM171A1Q5VUB5 890 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 RRAGBQ5VZM2 374 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 LIN54Q6MZP7 749 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ERICH5Q6P6B1 374 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF852Q6ZMS4 543 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CDKL3Q8IVW4 592 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CCDC103Q8IW40 242 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MPP5Q8N3R9 675 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FBXW8Q8N3Y1 598 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 OR4M1Q8NGD0 313 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 RHOXF1Q8NHV9 184 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CD101Q93033 1021 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 NTAN1Q96AB6 310 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 HSFY1Q96LI6 401 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 NEU1Q99519 415 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 IL12RB2Q99665 862 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FAM213AQ9BRX8 229 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TRIM56Q9BRZ2 755 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 LRRC2Q9BYS8 371 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ZYG11BQ9C0D3 744 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SLC22A4Q9H015 551 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 WWP1Q9H0M0 922 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 CATSPERBQ9H7T0 1116 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 FBXO6Q9NRD1 293 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 THUMPD1Q9NXG2 353 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 WHRNQ9P202 907 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 ANKRD6Q9Y2G4 727 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TCAF1Q9Y4C2 921 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 LAMB4A4D0S4 1761 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
COMMD3-215ENST00000602574 A0A0G2JND7 137 aa8.88□□□□□ -0.99
COMMD3-215ENST00000602574 TRABD2BA6NFA1 517 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms