RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	GLT1D1	Q96MS3	346 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GPR20	Q99678	358 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TBL1Y	Q9BQ87	522 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DUSP16	Q9BY84	665 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BRINP2	Q9C0B6	783 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SEMA6A	Q9H2E6	1030 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ALG2	Q9H553	416 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GORASP2	Q9H8Y8	452 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NANOG	Q9H9S0	305 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZFYVE28	Q9HCC9	887 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	AKIP1	Q9NQ31	210 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TREX1	Q9NSU2	369 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF358	Q9NW07	568 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	COMMD8	Q9NX08	183 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CCDC167	Q9P0B6	97 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RGS17	Q9UGC6	210 aa	Predicted RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FBXW11	Q9UKB1	542 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	OAZ3	Q9UMX2	235 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDHGB4	Q9UN71	923 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ERVK-11	Q9UQG0	969 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	VPS9D1	Q9Y2B5	631 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDHGB5	Q9Y5G0	923 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SYCE1L	A8MT33	242 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		A8MT66	165 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZBTB42	B2RXF5	422 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BOLA2-SMG1P6	H3BVE0	249 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC16A6	O15403	523 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CSPG5	O95196	566 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MLYCD	O95822	493 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GSN	P06396	782 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MMP10	P09238	476 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	THRB	P10828	461 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CKMT2	P17540	419 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ERCC2	P18074	760 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	WARS	P23381	471 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC6A2	P23975	617 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KRT6C	P48668	564 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PRIM2	P49643	509 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SUOX	P51687	545 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PPP5C	P53041	499 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ARSF	P54793	590 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	IRF9	Q00978	393 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SP2	Q02086	613 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NRG1	Q02297	640 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	EMX2	Q04743	252 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRAF2	Q12933	501 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FADD	Q13158	208 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PEX6	Q13608	980 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM132B	Q14DG7	1078 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	AMHR2	Q16671	573 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SV2C	Q496J9	727 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FGD3	Q5JSP0	725 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PLEKHG7	Q6ZR37	379 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PTF1A	Q7RTS3	328 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZDHHC13	Q8IUH4	622 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	EPHX4	Q8IUS5	362 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CMTR2	Q8IYT2	770 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDH20	Q8N6Y1	951 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CCDC185	Q8N715	623 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TXNDC5	Q8NBS9	432 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ABHD11	Q8NFV4	315 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	OR8J3	Q8NGG0	315 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	VPS33A	Q96AX1	596 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF512	Q96ME7	567 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NSMCE2	Q96MF7	247 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PPP1R10	Q96QC0	940 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	AGAP2	Q99490	1192 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	APBA2	Q99767	749 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DCUN1D5	Q9BTE7	237 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDHAC1	Q9H158	963 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TFB2M	Q9H5Q4	396 aa	Known RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RETREG1	Q9H6L5	497 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SYNDIG1	Q9H7V2	258 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DIABLO	Q9NR28	239 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	INIP	Q9NRY2	104 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	IGSF5	Q9NSI5	407 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DNAJB9	Q9UBS3	223 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	HMGXB4	Q9UGU5	601 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SUN2	Q9UH99	717 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DAPK2	Q9UIK4	370 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PACSIN3	Q9UKS6	424 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FBXO5	Q9UKT4	447 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRPC5	Q9UL62	973 aa	Predicted RBP	11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TPRKB	Q9Y3C4	175 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TSC22D4	Q9Y3Q8	395 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RIPK3	Q9Y572	518 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ORC6	Q9Y5N6	252 aa		11.75	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PNMA8C	A0A1B0GUJ8	204 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TCRBV5S2	A0A599	114 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FAM234B	A2RU67	622 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KRBA1	A5PL33	1030 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	STX16-NPEPL1	H3BU86	382 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	NME4	O00746	187 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	STX16	O14662	325 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MAGEB3	O15480	346 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ADAM23	O75077	832 aa		11.74	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RSL1D1	O76021	490 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms