RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 PATE3B3GLJ2 98 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 E7EVH7 732 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 KHNYNO15037 678 aaKnown RBP19.35■□□□□ 0.69
UPF1-209ENST00000600310 CLDN7O95471 211 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 ECEL1O95672 775 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 GAS8O95995 478 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 C1SP09871 688 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 PIRTP0C851 137 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 CD38P28907 300 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 LRRC14Q15048 493 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 TEAD4Q15561 434 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 CSRP2Q16527 193 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 WSCD2Q2TBF2 565 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 TRIM61Q5EBN2 209 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 DENND5AQ6IQ26 1287 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 LYSMD3Q7Z3D4 306 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 TECPR1Q7Z6L1 1165 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 IQCHQ86VS3 1027 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 FAM174AQ8TBP5 190 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 DTD2Q96FN9 168 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 RUNDC3BQ96NL0 473 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 SMOC1Q9H4F8 434 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 TRABDQ9H4I3 376 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 ZFYVE1Q9HBF4 777 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 PARD6AQ9NPB6 346 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 HACD3Q9P035 362 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 CA5BQ9Y2D0 317 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 ZNF711Q9Y462 761 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 SPO11Q9Y5K1 396 aa19.35■□□□□ 0.69
UPF1-209ENST00000600310 VILLO15195 856 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 USP12O75317 370 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 URI1O94763 535 aaPredicted RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 SUN1O94901 812 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 WNT1P04628 370 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 CFIP05156 583 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 CSNK1EP49674 416 aaKnown RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 CLDN2P57739 230 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 IRX4P78413 519 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 OVGP1Q12889 678 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 MSLNQ13421 630 aaPredicted RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 TRIP13Q15645 432 aaPredicted RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 KCTD19Q17RG1 926 aaPredicted RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 DENND2CQ68D51 928 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 GCNT7Q6ZNI0 430 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 Q6ZVL8 140 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 TMC3Q7Z5M5 1100 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 ABI3BPQ7Z7G0 1075 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 LINC00523Q86TU6 105 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 KLHL7Q8IXQ5 586 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 SPATA4Q8NEY3 305 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 CCHCR1Q8TD31 782 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 BMFQ96LC9 184 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 EIF2B3Q9NR50 452 aaKnown RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 MBNL1Q9NR56 388 aaKnown RBP19.34■□□□□ 0.69
UPF1-209ENST00000600310 SHOC2Q9UQ13 582 aa19.34■□□□□ 0.69
UPF1-209ENST00000600310 FPGTO14772 594 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 APRTP07741 180 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 IGFALSP35858 605 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 ETV3P41162 512 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 PTGIRP43119 386 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 LMAN1P49257 510 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 VPS41P49754 854 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 BASP1P80723 227 aaKnown RBP19.33■□□□□ 0.68
UPF1-209ENST00000600310 GPS1Q13098 491 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 IRF4Q15306 451 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 KYAT3Q6YP21 454 aaKnown RBP19.33■□□□□ 0.68
UPF1-209ENST00000600310 ZNF572Q7Z3I7 529 aaPredicted RBP19.33■□□□□ 0.68
UPF1-209ENST00000600310 NRSN1Q8IZ57 195 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 KIF18AQ8NI77 898 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 SKA1Q96BD8 255 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 EID2BQ96D98 161 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 NUS1Q96E22 293 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 NUSAP1Q9BXS6 441 aaKnown RBP19.33■□□□□ 0.68
UPF1-209ENST00000600310 GPR63Q9BZJ6 419 aa19.33■□□□□ 0.68
UPF1-209ENST00000600310 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 RGSL1A5PLK6 1076 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 POM121BA6NF01 834 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 GOLGA8CPA6NN73 597 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 A6NNZ2 444 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 H0Y8X5 98 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 AURKAO14965 403 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 FOXD2O60548 495 aaPredicted RBP19.32■□□□□ 0.68
UPF1-209ENST00000600310 SPINT3P49223 89 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 PFN3P60673 137 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 CKAP4Q07065 602 aaKnown RBP19.32■□□□□ 0.68
UPF1-209ENST00000600310 TUBB2AQ13885 445 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 PPP1R7Q15435 360 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 TCEAL6Q6IPX3 200 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 LAYNQ6UX15 382 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 RFLNAQ6ZTI6 216 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 SYDE1Q6ZW31 735 aaPredicted RBP19.32■□□□□ 0.68
UPF1-209ENST00000600310 NLRP8Q86W28 1048 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 TTC30BQ8N4P2 665 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 GPR161Q8N6U8 529 aaKnown RBP19.32■□□□□ 0.68
UPF1-209ENST00000600310 BLOC1S5Q8TDH9 187 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 TCEAL3Q969E4 200 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 KLHDC7BQ96G42 594 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 TUBB2BQ9BVA1 445 aa19.32■□□□□ 0.68
UPF1-209ENST00000600310 PKD2L2Q9NZM6 624 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms