RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 A8MX80 341 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 POC1B-GALNT4F8VUJ3 575 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CCL22O00626 93 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 TCEA3O75764 348 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PIAS1O75925 651 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CLDN7O95471 211 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ADRB3P13945 408 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 C5AR1P21730 350 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ARNTP27540 789 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MMP12P39900 470 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ARCN1P48444 511 aaKnown RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 SUOXP51687 545 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ARSDP51689 593 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ARHGEF7Q14155 803 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 KRT71Q3SY84 523 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 DPPA4Q7L190 304 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CTAGE3PQ8IX95 158 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PBXIP1Q96AQ6 731 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 NELL2Q99435 816 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 TMEM109Q9BVC6 243 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ROPN1BQ9BZX4 212 aaPredicted RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 FOXQ1Q9C009 403 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MKRN2Q9H000 416 aaKnown RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 PPCSQ9HAB8 311 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ROPN1Q9HAT0 212 aaPredicted RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 LMAN1LQ9HAT1 526 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CD248Q9HCU0 757 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 SMYD2Q9NRG4 433 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 IL17CQ9P0M4 197 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ZFATQ9P243 1243 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 VPS18Q9P253 973 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 FETUBQ9UGM5 382 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 SMIM23A6NLE4 172 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CXorf49A8MYA2 514 aaPredicted RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 AGPSO00116 658 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PLK4O00444 970 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 RASGRF2O14827 1237 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 SLC7A4O43246 635 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ZNF30P17039 623 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PSMA3P25788 255 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 DRD3P35462 400 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 HADHAP40939 763 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 P2RY2P41231 377 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 ELP6Q0PNE2 266 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 CNTN1Q12860 1018 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 NAB1Q13506 487 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 THOC5Q13769 683 aaKnown RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 HSP90AA5PQ58FG0 334 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MARK2Q7KZI7 788 aaKnown RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 CROCCP2Q86T23 111 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 LRRC6Q86X45 466 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 TMPRSS6Q8IU80 811 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 AADATQ8N5Z0 425 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PPM1NQ8N819 430 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 OR6P1Q8NGX9 317 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 HDAC10Q969S8 669 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 RAB7BQ96AH8 199 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 EID2BQ96D98 161 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MRRFQ96E11 262 aaKnown RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 TBATAQ96M53 351 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 PAFAH2Q99487 392 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 C19orf43Q9BQ61 176 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MFSD1Q9H3U5 465 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 TBC1D17Q9HA65 648 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 BPIFA1Q9NP55 256 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 GGT7Q9UJ14 662 aa14.66□□□□□ -0.06
VRK3-212ENST00000596814 MTF2Q9Y483 593 aaPredicted RBP14.66□□□□□ -0.06
VRK3-212ENST00000596814 TLDC2A0PJX2 215 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 GOLGA6L10A6NI86 522 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 FAM170BA6NMN3 283 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 CHURC1-FNTBB4DL54 471 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 GOLGA8KD6RF30 607 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 GOLGA8TH3BQL2 631 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 DNTTP04053 509 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 SLCO1A2P46721 670 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 RALGDSQ12967 914 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 CRY1Q16526 586 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 AFTPHQ6ULP2 937 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 TMEM92Q6UXU6 159 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 GABPB2Q8TAK5 448 aaPredicted RBP14.65□□□□□ -0.06
VRK3-212ENST00000596814 CDKN2AIPNLQ96HQ2 116 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 FAM167BQ9BTA0 163 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 CD320Q9NPF0 282 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 IARS2Q9NSE4 1012 aaKnown RBP14.65□□□□□ -0.06
VRK3-212ENST00000596814 SLC17A6Q9P2U8 582 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 SLC24A2Q9UI40 661 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 FKBPLQ9UIM3 349 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 ITM2BQ9Y287 266 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 IKBKGQ9Y6K9 419 aa14.65□□□□□ -0.06
VRK3-212ENST00000596814 A0A1W2PP55 124 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 TCRBV21S2A2A0A5A6 115 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 CCDC162PA2VCL2 907 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 H7C0S8 307 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 AREL1O15033 823 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 SPINT1O43278 529 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 CDH16O75309 829 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
VRK3-212ENST00000596814 INHBAP08476 426 aa14.64□□□□□ -0.07
VRK3-212ENST00000596814 C1SP09871 688 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms