RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 LMNAP02545 664 aaKnown RBP10.57□□□□□ -0.72
LIG1-210ENST00000596332 FGF1P05230 155 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 RETP07949 1114 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 TRIM23P36406 574 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 MAGEA3P43357 314 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 VPS41P49754 854 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CLDN2P57739 230 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 PFN3P60673 137 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 LMNB2Q03252 620 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CBLBQ13191 982 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 PRPSAP1Q14558 356 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CCDC6Q16204 474 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CERCAMQ5T4B2 595 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 KCTD16Q68DU8 428 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 LAIR1Q6GTX8 287 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 ERAP2Q6P179 960 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 LAYNQ6UX15 382 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 C4orf22Q6V702 233 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 GSTA5Q7RTV2 222 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 ABI3BPQ7Z7G0 1075 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 NLRP8Q86W28 1048 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 SPATS2Q86XZ4 545 aaKnown RBP10.57□□□□□ -0.72
LIG1-210ENST00000596332 SYT12Q8IV01 421 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 KIF18AQ8NI77 898 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 SCAMP4Q969E2 229 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 RMDN1Q96DB5 314 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 DTD2Q96FN9 168 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 IFT43Q96FT9 208 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 ZNF778Q96MU6 729 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 SLC6A18Q96N87 628 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 FERMT1Q9BQL6 677 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 ADGRE3Q9BY15 652 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 LRRC40Q9H9A6 602 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 PLAC1Q9HBJ0 212 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 FSCN3Q9NQT6 498 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 RXFP3Q9NSD7 469 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 CNOT6Q9ULM6 557 aaKnown RBP10.57□□□□□ -0.72
LIG1-210ENST00000596332 ZNF711Q9Y462 761 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 HS3ST3A1Q9Y663 406 aa10.57□□□□□ -0.72
LIG1-210ENST00000596332 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 GOLGA6L10A0A0M3HER8 536 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 MROH6A6NGR9 719 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 PSMD11O00231 422 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 DNALI1O14645 258 aaPredicted RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 PSMD3O43242 534 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 BUD23O43709 281 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 AVILO75366 819 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 ECEL1O95672 775 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 FUCA1P04066 466 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 APRTP07741 180 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 CYP2A6P11509 494 aaPredicted RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 ZNF30P17039 623 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 BPIP17213 487 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 TPSB2P20231 275 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 HMGCLP35914 325 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 RPL21P46778 160 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 SPINT3P49223 89 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 CSNK1EP49674 416 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 IRX4P78413 519 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 XIAPP98170 497 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 DR1Q01658 176 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 DPTQ07507 201 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 DHX34Q14147 1143 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 TPSAB1Q15661 275 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 ELF2Q15723 593 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 TCEAL6Q6IPX3 200 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 NAPEPLDQ6IQ20 393 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 USP45Q70EL2 814 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 CYP2U1Q7Z449 544 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 RAVER1Q8IY67 606 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 MMGT1Q8N4V1 131 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 BRSK1Q8TDC3 778 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 CXorf40AQ8TE69 158 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 SEC14L1Q92503 715 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 PIGKQ92643 395 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 TCEAL3Q969E4 200 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 PWWP2AQ96N64 755 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 WDR83Q9BRX9 315 aaKnown RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 LGR4Q9BXB1 951 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 ZFYVE1Q9HBF4 777 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 GRHL1Q9NZI5 618 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 FEZ2Q9UHY8 353 aaPredicted RBP10.56□□□□□ -0.72
LIG1-210ENST00000596332 CD84Q9UIB8 345 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 DMTF1Q9Y222 760 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 PCDHGA5Q9Y5G8 931 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 ARL5AQ9Y689 179 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 SPAG17Q6Q759 2223 aa10.56□□□□□ -0.72
LIG1-210ENST00000596332 TRPM6Q9BX84 2022 aa10.55□□□□□ -0.72
LIG1-210ENST00000596332 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
LIG1-210ENST00000596332 C1orf232A0A0U1RR37 186 aa10.55□□□□□ -0.72
LIG1-210ENST00000596332 FADS2P1A8MWK0 482 aa10.55□□□□□ -0.72
LIG1-210ENST00000596332 PRAMEF26H0Y7S4 382 aa10.55□□□□□ -0.72
LIG1-210ENST00000596332 NEMP1O14524 444 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms