RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 ESRP1Q6NXG1 681 aaKnown RBP15.13■□□□□ 0.01
TRIM28-205ENST00000595028 NPNTQ6UXI9 565 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 SPOCD1Q6ZMY3 1216 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 KATNAL2Q8IYT4 538 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRIM28-205ENST00000595028 PLA2G15Q8NCC3 412 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 TPCN2Q8NHX9 752 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 LMX1AQ8TE12 382 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 NUS1Q96E22 293 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 SCRN2Q96FV2 425 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 WDR92Q96MX6 357 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 SLC13A1Q9BZW2 595 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 SPASTQ9UBP0 616 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 SALL4Q9UJQ4 1053 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 PPIL1Q9Y3C6 166 aa15.13■□□□□ 0.01
TRIM28-205ENST00000595028 LY6G6EA0A0G2JKS1 128 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 A0A0J9YYE9 177 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 JCHAINP01591 159 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 TRBC1P01850 177 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ALPIP09923 528 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 KRT10P13645 584 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 CTPS1P17812 591 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 BLKP51451 505 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 VAV2P52735 878 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 PPARDQ03181 441 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 AP1B1Q10567 949 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ARHGEF7Q14155 803 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 TFDP2Q14188 446 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 PRRT3Q5FWE3 981 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ZCCHC8Q6NZY4 707 aaKnown RBP15.12■□□□□ 0.01
TRIM28-205ENST00000595028 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 TSPAN33Q86UF1 283 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 TMEM139Q8IV31 216 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 CNTD1Q8N815 330 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 FAM181AQ8N9Y4 354 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ACRBPQ8NEB7 543 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 FUBP1Q96AE4 644 aaKnown RBP15.12■□□□□ 0.01
TRIM28-205ENST00000595028 DTD2Q96FN9 168 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 CRELD1Q96HD1 420 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 CALR3Q96L12 384 aaKnown RBP15.12■□□□□ 0.01
TRIM28-205ENST00000595028 APOLD1Q96LR9 279 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 BAG1Q99933 345 aaPredicted RBP15.12■□□□□ 0.01
TRIM28-205ENST00000595028 BRD8Q9H0E9 1235 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 WDR26Q9H7D7 661 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 USP29Q9HBJ7 922 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 KCTD5Q9NXV2 234 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 KLQ9UEF7 1012 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 U3KQA8 63 aa15.12■□□□□ 0.01
TRIM28-205ENST00000595028 MYLKQ15746 1914 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CAPN8A6NHC0 703 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 BTNL10A8MVZ5 291 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CACNB4O00305 520 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 GCATO75600 419 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 C1QL1O75973 258 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 RASGRP1O95267 797 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 MMP2P08253 660 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CKMT1AP12532 417 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 PECAM1P16284 738 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 TGM2P21980 687 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 HNF1BP35680 557 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 ETV3P41162 512 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CD86P42081 329 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 NR2C2P49116 596 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 HK3P52790 923 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 EPHB1P54762 984 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 RPL26P61254 145 aaKnown RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 PRKD1Q15139 912 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 PTPRRQ15256 657 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 DEFB133Q30KQ1 61 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 TFDP3Q5H9I0 405 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 FAXCQ5TGI0 409 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 LRRC66Q68CR7 880 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 DENND2CQ68D51 928 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 HSD11B1LQ7Z5J1 315 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 TMPRSS12Q86WS5 348 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 HID1Q8IV36 788 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 NDUFAF2Q8N183 169 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 PELI3Q8N2H9 469 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CBARPQ8N350 705 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 FSTL5Q8N475 847 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 KRT35Q92764 455 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 PDXPQ96GD0 296 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 RBM41Q96IZ5 413 aaKnown RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 SMIM14Q96QK8 99 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CEP41Q9BYV8 373 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 EVA1BQ9NVM1 165 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 IMPACTQ9P2X3 320 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 RPL26L1Q9UNX3 145 aaKnown RBP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 CHKBQ9Y259 395 aa15.11■□□□□ 0.01
TRIM28-205ENST00000595028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM28-205ENST00000595028 FAM149AA5PLN7 773 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 LMO7DNF2Z398 122 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 TPP1O14773 563 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 PJA2O43164 708 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 CST8O60676 142 aa15.1■□□□□ 0.01
TRIM28-205ENST00000595028 ZRANB2O95218 330 aaKnown RBP eCLIP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms