RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 EIF3BP55884 814 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 RACK1P63244 317 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 IRX4P78413 519 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 TMEM52BQ4KMG9 183 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 FAM182AQ5T1J6 154 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 DARS2Q6PI48 645 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 CCDC121Q6ZUS5 278 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 SLC13A5Q86YT5 568 aaPredicted RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 CXorf40AQ8TE69 158 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 KLK6Q92876 244 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CENPTQ96BT3 561 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 SLC17A9Q9BYT1 436 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 SLC25A51Q9H1U9 297 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CNOT10Q9H9A5 744 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 GLOD4Q9HC38 313 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 CAPN10Q9HC96 672 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 KLC4Q9NSK0 619 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 PHTF1Q9UMS5 762 aa19.7■□□□□ 0.74
LSM4-203ENST00000593829 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.7■□□□□ 0.74
LSM4-203ENST00000593829 ZNF292O60281 2723 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 ANKRD36A6QL64 1941 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 NFKBIAP25963 317 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 IFT88Q13099 833 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 IHHQ14623 411 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 RNF187Q5TA31 235 aaPredicted RBP19.69■□□□□ 0.74
LSM4-203ENST00000593829 IMP4Q96G21 291 aaKnown RBP19.69■□□□□ 0.74
LSM4-203ENST00000593829 C10orf88Q9H8K7 445 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 KLHL8Q9P2G9 620 aaPredicted RBP19.69■□□□□ 0.74
LSM4-203ENST00000593829 TRHDEQ9UKU6 1024 aa19.69■□□□□ 0.74
LSM4-203ENST00000593829 IGLON5A6NGN9 336 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 SLC31A1O15431 190 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 ZNF189O75820 626 aaPredicted RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 PRKCGP05129 697 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 MMP2P08253 660 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 MMP12P39900 470 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 SGCGQ13326 291 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 TEAD4Q15561 434 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 AASDHQ4L235 1098 aaPredicted RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 NAPEPLDQ6IQ20 393 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 SLC6A18Q96N87 628 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 C1QTNF2Q9BXJ5 285 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 TDRD1Q9BXT4 1180 aaKnown RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 AASDHPPTQ9NRN7 309 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 R3HDM2Q9Y2K5 976 aaKnown RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 PRAMEF26H0Y7S4 382 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 FZD6O60353 706 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 MMP20O60882 483 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 GRIA4P48058 902 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 CSNK1EP49674 416 aaKnown RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 LMNB2Q03252 620 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 PID1Q7Z2X4 250 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 TMC3Q7Z5M5 1100 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 NDUFAF2Q8N183 169 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 ZNF567Q8N184 647 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 RBM15Q96T37 977 aaKnown RBP eCLIP19.68■□□□□ 0.745e-7■■■■□ 23.6
LSM4-203ENST00000593829 WRAP53Q9BUR4 548 aaKnown RBP19.68■□□□□ 0.74
LSM4-203ENST00000593829 TXLNGYQ9BZA5 131 aa19.68■□□□□ 0.74
LSM4-203ENST00000593829 LNP1A1A4G5 178 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 STK10O94804 968 aaKnown RBP19.67■□□□□ 0.74
LSM4-203ENST00000593829 SYPP08247 313 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 PDHA1P08559 390 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 DPPA4Q7L190 304 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 ADAT2Q7Z6V5 191 aaKnown RBP19.67■□□□□ 0.74
LSM4-203ENST00000593829 PIH1D2Q8WWB5 315 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 ASB12Q8WXK4 309 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 TLCD1Q96CP7 247 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 PCDH9Q9HC56 1237 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 SLC40A1Q9NP59 571 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 PPANQ9NQ55 473 aaKnown RBP19.67■□□□□ 0.74
LSM4-203ENST00000593829 CHKBQ9Y259 395 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 GVINP1Q7Z2Y8 2422 aa19.67■□□□□ 0.74
LSM4-203ENST00000593829 KCNN4O15554 427 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 TM7SF2O76062 418 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 PAK4O96013 591 aaPredicted RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 HNRNPA2B1P22626 353 aaKnown RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 CD38P28907 300 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 AKT2P31751 481 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 HPDP32754 393 aaPredicted RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 CD68P34810 354 aaPredicted RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 RPL26P61254 145 aaKnown RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 SEMG2Q02383 582 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 FGL2Q14314 439 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 STAT4Q14765 748 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 SLC14A2Q15849 920 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 SLC35B2Q8TB61 432 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 SKA1Q96BD8 255 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 FRMD8P1Q9BZ68 369 aaPredicted RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 RPL26L1Q9UNX3 145 aaKnown RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 PPIL1Q9Y3C6 166 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 PTPRZ1P23471 2315 aaPredicted RBP19.66■□□□□ 0.74
LSM4-203ENST00000593829 CFAP69A5D8W1 941 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 ARHGAP33O14559 1287 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 WNT9AO14904 365 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 PPFIA2O75334 1257 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 PRLP01236 227 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 ENGP17813 658 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 NFKB1P19838 968 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 EPHB1P54762 984 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 WLSQ5T9L3 541 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 USP45Q70EL2 814 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms