RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 C1orf61Q13536 156 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 DPYSL3Q14195 570 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 RALGPS1Q5JS13 557 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 COLEC12Q5KU26 742 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 FAXCQ5TGI0 409 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 H2AFVQ71UI9 128 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CPNE8Q86YQ8 564 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 IFI44Q8TCB0 444 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CTNNBL1Q8WYA6 563 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-213ENST00000593254 GRAMD1AQ96CP6 724 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-213ENST00000593254 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CLPBQ9H078 707 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 OR1A2Q9Y585 309 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 PCDHGA8Q9Y5G5 932 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 MFSD11O43934 449 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 PCCBP05166 539 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ANXA6P08133 673 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 TGM2P21980 687 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 RBMS1P29558 406 aaKnown RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 SSR1P43307 286 aaKnown RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 MMP13P45452 471 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ADKP55263 362 aaKnown RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 MAXP61244 160 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 PAFAH1B3Q15102 231 aaKnown RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ELOCQ15369 112 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 CDKN3Q16667 212 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ALG11Q2TAA5 492 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 NCBP2-AS2Q69YL0 99 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 GUSBP11Q6P575 273 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 CCDC81Q6ZN84 652 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 VSTM4Q8IW00 320 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 SLC35F3Q8IY50 421 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 FSTL5Q8N475 847 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 TEX26Q8N6G2 289 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 PLA2G15Q8NCC3 412 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 PCDH19Q8TAB3 1148 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 NSMCE1Q8WV22 266 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 TSACCQ96A04 125 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-213ENST00000593254 WDR92Q96MX6 357 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 ABCG4Q9H172 646 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 NOD2Q9HC29 1040 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 B4GALT6Q9UBX8 382 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 LCMT1Q9UIC8 334 aa13.23□□□□□ -0.29
H3F3B-213ENST00000593254 CPED1A4D0V7 1026 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 YY2O15391 372 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 EFSO43281 561 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 RASGRP1O95267 797 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 CPP00450 1065 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 CELA2BP08218 269 aaPredicted RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 KRT7P08729 469 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 TMEM253P0C7T8 217 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 MAN1A1P33908 653 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 GJC1P36383 396 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 TRIM23P36406 574 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 GARSP41250 739 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 TAS2R40P59535 323 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 KIAA1024LP59773 190 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 GALNT2Q10471 571 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 TRAF2Q12933 501 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 CLN3Q13286 438 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 PDK2Q15119 407 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 NR0B2Q15466 257 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 LINC00303Q3SY05 128 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ANKRD20A8PQ5CZ79 823 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ENPP7Q6UWV6 458 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 EFL1Q7Z2Z2 1120 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 CLEC14AQ86T13 490 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 HID1Q8IV36 788 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 MAPK15Q8TD08 544 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 PDCD6IPQ8WUM4 868 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 MAML1Q92585 1016 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 GLMNQ92990 594 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 FUBP1Q96AE4 644 aaKnown RBP13.22□□□□□ -0.29
H3F3B-213ENST00000593254 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 PDXPQ96GD0 296 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 COQ10AQ96MF6 247 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 FAM117AQ9C073 453 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 STARD5Q9NSY2 213 aa13.22□□□□□ -0.29
H3F3B-213ENST00000593254 ABHD10Q9NUJ1 306 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms