RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MAGEE1Q9HCI5 957 aa13.51□□□□□ -0.25
VMP1-217ENST00000593168 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
VMP1-217ENST00000593168 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
VMP1-217ENST00000593168 PHTF1Q9UMS5 762 aa13.51□□□□□ -0.25
VMP1-217ENST00000593168 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
VMP1-217ENST00000593168 NOVA2Q9UNW9 492 aaKnown RBP13.51□□□□□ -0.25
VMP1-217ENST00000593168 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
VMP1-217ENST00000593168 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 MAP1BP46821 2468 aaKnown RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 PIGNO95427 931 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 ADRB1P08588 477 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 ERVK-10P10266 1014 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 GKP32189 559 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 SLC8A1P32418 973 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 ARCN1P48444 511 aaKnown RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 SERPINB9P50453 376 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 EPHB1P54762 984 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 PDE1BQ01064 536 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 TAF1AQ15573 450 aaPredicted RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 CNGA3Q16281 694 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 SKIDA1Q1XH10 827 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 KCTD16Q68DU8 428 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 KCNMB4Q86W47 210 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 CYP4X1Q8N118 509 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 NDUFAF2Q8N183 169 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 HCAR2Q8TDS4 363 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 C19orf43Q9BQ61 176 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 OSBPL1AQ9BXW6 950 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 FAM126AQ9BYI3 521 aaPredicted RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 TMEM245Q9H330 911 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 PPANQ9NQ55 473 aaKnown RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 NSMCE4AQ9NXX6 385 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 THAP10Q9P2Z0 257 aaPredicted RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 CTNNAL1Q9UBT7 734 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 MRPS17Q9Y2R5 130 aaKnown RBP13.5□□□□□ -0.25
VMP1-217ENST00000593168 PPIL1Q9Y3C6 166 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 SPO11Q9Y5K1 396 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 RALGAPA1Q6GYQ0 2036 aa13.5□□□□□ -0.25
VMP1-217ENST00000593168 A0A0J9YYE9 177 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 IQANK1A0A1B0GTG1 560 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 C2orf81A6NN90 581 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 NPC1O15118 1278 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 SLC7A4O43246 635 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 BNIP3LO60238 219 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 SIN3BO75182 1162 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 PIAS1O75925 651 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 TRBC1P01850 177 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 CNTFP26441 200 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 TNFRSF4P43489 277 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 GALK1P51570 392 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 ST3GAL2Q16842 350 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 HNRNPA1L2Q32P51 320 aaKnown RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 FNDC3BQ53EP0 1204 aaKnown RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 HSP90AA5PQ58FG0 334 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 EMC10Q5UCC4 262 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 GLT6D1Q7Z4J2 308 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 RASSF3Q86WH2 238 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 CNTN4Q8IWV2 1026 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 CHST14Q8NCH0 376 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 MDGA1Q8NFP4 955 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 OR13J1Q8NGT2 312 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 MRRFQ96E11 262 aaKnown RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 LYSMD1Q96S90 227 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 CPNE1Q99829 537 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 P2RY13Q9BPV8 354 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 CHRDQ9H2X0 955 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 C8orf33Q9H7E9 229 aaPredicted RBP13.49□□□□□ -0.25
VMP1-217ENST00000593168 ZFATQ9P243 1243 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 SLC2A6Q9UGQ3 507 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 TBK1Q9UHD2 729 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 ACTL7BQ9Y614 415 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 WASF2Q9Y6W5 498 aa13.49□□□□□ -0.25
VMP1-217ENST00000593168 EDDM13A0A1B0GTR0 161 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 TSPAN11A1L157 253 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 FAM155BO75949 473 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 KRT38O76015 456 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 VAPBO95292 243 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 PRKCGP05129 697 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 UGT2B4P06133 528 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 PIRTP0C851 137 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 HNRNPLP14866 589 aaKnown RBP eCLIP13.48□□□□□ -0.257e-9■■■■■ 28.7
VMP1-217ENST00000593168 LPOP22079 712 aaPredicted RBP13.48□□□□□ -0.25
VMP1-217ENST00000593168 ARNTP27540 789 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 GP5P40197 560 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 ABL2P42684 1182 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 MAGOHP61326 146 aaKnown RBP13.48□□□□□ -0.25
VMP1-217ENST00000593168 ZNF234Q14588 700 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 TMED2Q15363 201 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 PPM1JQ5JR12 505 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 GRTP1Q5TC63 336 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 LAIR1Q6GTX8 287 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 BRAT1Q6PJG6 821 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms