RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 NXF3Q9H4D5 531 aaKnown RBP18.01■□□□□ 0.47
SPC24-206ENST00000592540 SOX17Q9H6I2 414 aaPredicted RBP18.01■□□□□ 0.47
SPC24-206ENST00000592540 SLC30A1Q9Y6M5 507 aa18.01■□□□□ 0.47
SPC24-206ENST00000592540 IQCA1LA6NCM1 817 aa18■□□□□ 0.47
SPC24-206ENST00000592540 HUS1O60921 280 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CNMDO75829 334 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CPNE6O95741 557 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CD4P01730 458 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MYL3P08590 195 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ZNF286BP0CG31 522 aa18■□□□□ 0.47
SPC24-206ENST00000592540 NCAM1P13591 858 aa18■□□□□ 0.47
SPC24-206ENST00000592540 AKAP5P24588 427 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MAP4P27816 1152 aaKnown RBP18■□□□□ 0.47
SPC24-206ENST00000592540 POLR2IP36954 125 aaKnown RBP18■□□□□ 0.47
SPC24-206ENST00000592540 KCNC4Q03721 635 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CYP51A1Q16850 503 aa18■□□□□ 0.47
SPC24-206ENST00000592540 NIPAL1Q6NVV3 410 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ARMCX2Q7L311 632 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ZBTB46Q86UZ6 589 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CCDC117Q8IWD4 279 aaPredicted RBP18■□□□□ 0.47
SPC24-206ENST00000592540 OR13F1Q8NGS4 319 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MAGEE2Q8TD90 523 aaPredicted RBP18■□□□□ 0.47
SPC24-206ENST00000592540 ANKRD49Q8WVL7 239 aa18■□□□□ 0.47
SPC24-206ENST00000592540 UBXN10Q96LJ8 280 aa18■□□□□ 0.47
SPC24-206ENST00000592540 COLEC11Q9BWP8 271 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CCDC68Q9H2F9 335 aa18■□□□□ 0.47
SPC24-206ENST00000592540 IFT80Q9P2H3 777 aaPredicted RBP18■□□□□ 0.47
SPC24-206ENST00000592540 CORINQ9Y5Q5 1042 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MIA3Q5JRA6 1907 aa18■□□□□ 0.47
SPC24-206ENST00000592540 C9JVG2 144 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ADAM23O75077 832 aa18■□□□□ 0.47
SPC24-206ENST00000592540 SNAP29O95721 258 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CHRM3P20309 590 aa18■□□□□ 0.47
SPC24-206ENST00000592540 RFC2P35250 354 aa18■□□□□ 0.47
SPC24-206ENST00000592540 TAF6P49848 677 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MAPK10P53779 464 aa18■□□□□ 0.47
SPC24-206ENST00000592540 DAOAP59103 153 aa18■□□□□ 0.47
SPC24-206ENST00000592540 NR1D2Q14995 579 aa18■□□□□ 0.47
SPC24-206ENST00000592540 PLCL1Q15111 1095 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ZNF678Q5SXM1 525 aa18■□□□□ 0.47
SPC24-206ENST00000592540 CCNYL2Q5T2Q4 361 aa18■□□□□ 0.47
SPC24-206ENST00000592540 KIAA0408Q6ZU52 694 aa18■□□□□ 0.47
SPC24-206ENST00000592540 MIER2Q8N344 545 aa18■□□□□ 0.47
SPC24-206ENST00000592540 PNPT1Q8TCS8 783 aaKnown RBP18■□□□□ 0.47
SPC24-206ENST00000592540 SLC35B4Q969S0 331 aa18■□□□□ 0.47
SPC24-206ENST00000592540 LRRC58Q96CX6 371 aa18■□□□□ 0.47
SPC24-206ENST00000592540 PGAP3Q96FM1 320 aaPredicted RBP18■□□□□ 0.47
SPC24-206ENST00000592540 ZNF419Q96HQ0 510 aaPredicted RBP18■□□□□ 0.47
SPC24-206ENST00000592540 ARMC7Q9H6L4 198 aa18■□□□□ 0.47
SPC24-206ENST00000592540 GLOD4Q9HC38 313 aa18■□□□□ 0.47
SPC24-206ENST00000592540 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
SPC24-206ENST00000592540 GID8Q9NWU2 228 aa18■□□□□ 0.47
SPC24-206ENST00000592540 GIMAP2Q9UG22 337 aa18■□□□□ 0.47
SPC24-206ENST00000592540 GINS2Q9Y248 185 aa18■□□□□ 0.47
SPC24-206ENST00000592540 GJA3Q9Y6H8 435 aa18■□□□□ 0.47
SPC24-206ENST00000592540 COL1A2P08123 1366 aa18■□□□□ 0.47
SPC24-206ENST00000592540 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 TRIM43BA6NCK2 446 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 DFFAO00273 331 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 INPP4BO15327 924 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 ESRRBO95718 433 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 ALDH2P05091 517 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 MTHFD1P11586 935 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 ADRA1AP35348 466 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 CHRNA4P43681 627 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 TMBIM6P55061 237 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 OXCT1P55809 520 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 ADARB1P78563 741 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 SEPT6Q14141 434 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 APOBEC3FQ8IUX4 373 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 SULF1Q8IWU6 871 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 CLYBLQ8N0X4 340 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 L3HYPDHQ96EM0 354 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 MTG1Q9BT17 334 aaPredicted RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 MED10Q9BTT4 135 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 TDRD1Q9BXT4 1180 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 TRIM8Q9BZR9 551 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 TKTL2Q9H0I9 626 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 WDCPQ9H6R7 721 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 GOLGA2P5Q9HBQ8 144 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 DICER1Q9UPY3 1922 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 NRCAMQ92823 1304 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 SMIM28A0A1B0GU29 152 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 CDH3P22223 829 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 WARSP23381 471 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 PNPLA4P41247 253 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 KCNC1P48547 511 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 ZNF33AQ06730 810 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 SLC14A2Q15849 920 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 UNC50Q53HI1 259 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 PPP1R10Q96QC0 940 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 C1orf50Q9BV19 199 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 TUT1Q9H6E5 874 aaKnown RBP17.99■□□□□ 0.47
SPC24-206ENST00000592540 ALG9Q9H6U8 611 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 KLK14Q9P0G3 267 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 ERGIC3Q9Y282 383 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 PCDHA9Q9Y5H5 950 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 DNAJC15Q9Y5T4 150 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 PTGDR2Q9Y5Y4 395 aa17.99■□□□□ 0.47
SPC24-206ENST00000592540 CFAP99D6REC4 459 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms