RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 WDR26Q9H7D7 661 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 NCKIPSDQ9NZQ3 722 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 AMACRQ9UHK6 382 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 RALYQ9UKM9 306 aaKnown RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 DGKBQ9Y6T7 804 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 PKD1L2Q7Z442 2459 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 ARHGEF17Q96PE2 2063 aaPredicted RBP13.88□□□□□ -0.19
APOC1-208ENST00000592535 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 KCNK1O00180 336 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 PSMD11O00231 422 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 APOL1O14791 398 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 HOXC4P09017 264 aaPredicted RBP13.88□□□□□ -0.19
APOC1-208ENST00000592535 COMTP21964 271 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 TGM2P21980 687 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 KELP23276 732 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 SLC1A1P43005 524 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 RPIAP49247 311 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 PPIDQ08752 370 aaKnown RBP13.88□□□□□ -0.19
APOC1-208ENST00000592535 RTP5Q14D33 572 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 FAM182AQ5T1J6 154 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 LRRC38Q5VT99 294 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 NPNTQ6UXI9 565 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 Q6ZVL8 140 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 TPCN2Q8NHX9 752 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 GLMNQ92990 594 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 RBM15Q96T37 977 aaKnown RBP eCLIP13.88□□□□□ -0.19
APOC1-208ENST00000592535 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 SIRPGQ9P1W8 387 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 GULP1Q9UBP9 304 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 CHKBQ9Y259 395 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 PCDHB1Q9Y5F3 818 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 HEY1Q9Y5J3 304 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 AK5Q9Y6K8 562 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 URB1O60287 2271 aaKnown RBP13.88□□□□□ -0.19
APOC1-208ENST00000592535 DMXL2Q8TDJ6 3036 aa13.88□□□□□ -0.19
APOC1-208ENST00000592535 A0A0J9YYE9 177 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 CASC3O15234 703 aaKnown RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 SPOPO43791 374 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 CSO75390 466 aaKnown RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 LCA5LO95447 670 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 PRLP01236 227 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 JCHAINP01591 159 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 TRBC1P01850 177 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 MYCLP1P12525 358 aaPredicted RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 CES1P23141 567 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 MAGEA1P43355 309 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 EPHB1P54762 984 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 ZBTB17Q13105 803 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 LRRC66Q68CR7 880 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 LVRNQ6Q4G3 990 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 C19orf48Q6RUI8 117 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 RFLNAQ6ZTI6 216 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 TECPR1Q7Z6L1 1165 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 GKN2Q86XP6 184 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 RFX6Q8HWS3 928 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 NDUFAF2Q8N183 169 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 SDR16C5Q8N3Y7 309 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 ARL10Q8N8L6 244 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 KYQ8NBH2 561 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 DEPDC7Q96QD5 511 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 MAK16Q9BXY0 300 aaKnown RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 TEX101Q9BY14 249 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 GOLPH3Q9H4A6 298 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 CYP4F12Q9HCS2 524 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 HAUS2Q9NVX0 235 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
APOC1-208ENST00000592535 CD84Q9UIB8 345 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 PADI4Q9UM07 663 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 TFR2Q9UP52 801 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 GPR34Q9UPC5 381 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 KIF26BQ2KJY2 2108 aa13.87□□□□□ -0.19
APOC1-208ENST00000592535 FREM2Q5SZK8 3169 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 PRSS38A1L453 326 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 GOLGA6CA6NDK9 693 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 GOLGA6BA6NDN3 693 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 CAPN8A6NHC0 703 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 PDE2AO00408 941 aaPredicted RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 TNFRSF10CO14798 259 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 MMP2P08253 660 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 GOLGA6DP0CG33 693 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 KRT10P13645 584 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 ZNF75DP51815 510 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 HADHBP55084 474 aaKnown RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 DYNLT1P63172 113 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 IFI35P80217 286 aaPredicted RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 CDK3Q00526 305 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 AP1B1Q10567 949 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms