RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PRSS38A1L453 326 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 NOBOXO60393 691 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 HEXIM1O94992 359 aaKnown RBP18.88■□□□□ 0.61
CCDC43-205ENST00000592333 CPP00450 1065 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 SERPINC1P01008 464 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 PRKCGP05129 697 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 RARAP10276 462 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 AMPD1P23109 780 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 CFHR1Q03591 330 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 ZFP36L1Q07352 338 aaKnown RBP18.88■□□□□ 0.61
CCDC43-205ENST00000592333 DPTQ07507 201 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 ARHGAP40Q5TG30 622 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 HGSNATQ68CP4 663 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 PCSK4Q6UW60 755 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 NLRP8Q86W28 1048 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 C17orf82Q86X59 251 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-205ENST00000592333 CCNJLQ8IV13 435 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 ATPAF2Q8N5M1 289 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 FAM71BQ8TC56 605 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 GPBAR1Q8TDU6 330 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 MCCC1Q96RQ3 725 aaPredicted RBP18.88■□□□□ 0.61
CCDC43-205ENST00000592333 TMEM168Q9H0V1 697 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 CPNE5Q9HCH3 593 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC43-205ENST00000592333 HAUS2Q9NVX0 235 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 MYO1AQ9UBC5 1043 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 AMACRQ9UHK6 382 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 PCDHGC4Q9Y5F7 938 aa18.88■□□□□ 0.61
CCDC43-205ENST00000592333 NVLO15381 856 aaKnown RBP18.87■□□□□ 0.61
CCDC43-205ENST00000592333 PYGLP06737 847 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 SKILP12757 684 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 CCNB1P14635 433 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 UGT1A5P35504 534 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 TPM4P67936 248 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 ARHGEF7Q14155 803 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 IQCB1Q15051 598 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 CNGA3Q16281 694 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 TAF1BQ53T94 588 aaPredicted RBP18.87■□□□□ 0.61
CCDC43-205ENST00000592333 USP45Q70EL2 814 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 SPRED1Q7Z699 444 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 ZNF843Q8N446 348 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 TEX26Q8N6G2 289 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 FATE1Q969F0 183 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 DTD2Q96FN9 168 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 NSMCE3Q96MG7 304 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 LGR4Q9BXB1 951 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 GSDMCQ9BYG8 508 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 DPEP2Q9H4A9 486 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 SYNDIG1Q9H7V2 258 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 NOD2Q9HC29 1040 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 CYP4F12Q9HCS2 524 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.87■□□□□ 0.61
CCDC43-205ENST00000592333 LRIT1Q9P2V4 623 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 LCMT1Q9UIC8 334 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 ATXN7L1Q9ULK2 861 aaPredicted RBP18.87■□□□□ 0.61
CCDC43-205ENST00000592333 CFAP46Q8IYW2 2715 aa18.87■□□□□ 0.61
CCDC43-205ENST00000592333 PGLSO95336 258 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 SERPING1P05155 500 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 CYP1A2P05177 515 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 MMP13P45452 471 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 SLC25A11Q02978 314 aaKnown RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 ILF3Q12906 894 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 CLN3Q13286 438 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 NR1D2Q14995 579 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 SMTNL2Q2TAL5 461 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 TDRD12Q587J7 1177 aaKnown RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 ARMC12Q5T9G4 340 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 SPECC1LQ69YQ0 1117 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 FOXR1Q6PIV2 292 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 XKR5Q6UX68 686 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 CCDC81Q6ZN84 652 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 B3GNT8Q7Z7M8 397 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 TP53INP2Q8IXH6 220 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 PGBD5Q8N414 524 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 HSPH1Q92598 858 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 CCNL2Q96S94 520 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 CMKLR1Q99788 373 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 FRMD8Q9BZ67 464 aaPredicted RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 PCDH18Q9HCL0 1135 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 EPB41L5Q9HCM4 733 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 MRPL40Q9NQ50 206 aaKnown RBP18.86■□□□□ 0.61
CCDC43-205ENST00000592333 ETNK2Q9NVF9 386 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 DNPEPQ9ULA0 475 aa18.86■□□□□ 0.61
CCDC43-205ENST00000592333 MYO1FO00160 1098 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 PRB1P04280 392 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 CEACAM5P06731 702 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ZNF30P17039 623 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 CD82P27701 267 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 SLC5A2P31639 672 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ZBED6P86452 979 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 CDK3Q00526 305 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 KCTD16Q68DU8 428 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ALG1LQ6GMV1 187 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 TIGD7Q6NT04 549 aaPredicted RBP18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ZNF438Q7Z4V0 828 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 ZNF605Q86T29 641 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 HEATR4Q86WZ0 1026 aa18.85■□□□□ 0.61
CCDC43-205ENST00000592333 PDCD6IPQ8WUM4 868 aaKnown RBP18.85■□□□□ 0.61
CCDC43-205ENST00000592333 TTC9Q92623 222 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms