RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ARRDC2Q8TBH0 407 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 ALG3Q92685 438 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 OSBPL8Q9BZF1 889 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 BRD8Q9H0E9 1235 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 PNMA8BQ9ULN7 279 aaPredicted RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 GOLGA4Q13439 2230 aaKnown RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 A0A0U1RQS6 177 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 H7C0C1 242 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 K7ESM1 405 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 SCAMP1O15126 338 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 KRT86O43790 486 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 NRDCO43847 1150 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 HEXIM1O94992 359 aaKnown RBP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 CDK4P11802 303 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 JUPP14923 745 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 LHCGRP22888 699 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 ACP1P24666 158 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 PTPN3P26045 913 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 ATP5OP48047 213 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 COPS2P61201 443 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 HNRNPKP61978 463 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 SKOR1P84550 965 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 TARDBPQ13148 414 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 ARHGEF7Q14155 803 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 IHHQ14623 411 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 PCSK7Q16549 785 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 TSPAN33Q86UF1 283 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 LRRC8AQ8IWT6 810 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 NDUFAF2Q8N183 169 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 PIH1D2Q8WWB5 315 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 SPOCK2Q92563 424 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 SMIM14Q96QK8 99 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 HERPUD2Q9BSE4 406 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 TCEAL2Q9H3H9 227 aaPredicted RBP13.95□□□□□ -0.18
CLIP3-205ENST00000592017 PCDH9Q9HC56 1237 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 OR1A2Q9Y585 309 aa13.95□□□□□ -0.18
CLIP3-205ENST00000592017 PLXNB3Q9ULL4 1909 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 LY6G6EA0A0G2JKS1 128 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 CFAP69A5D8W1 941 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 GOLGA6CA6NDK9 693 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 F5H423 210 aaPredicted RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 H3BM21 787 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 FZD6O60353 706 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 APOC2P02655 101 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 MMP2P08253 660 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 CCDC175P0C221 793 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 GOLGA6DP0CG33 693 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 PYGMP11217 842 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 JUNDP17535 347 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 PEX5P50542 639 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 INSM1Q01101 510 aaPredicted RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 CYP4F3Q08477 520 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 INPP5AQ14642 412 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 HES3Q5TGS1 186 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 KDELC2Q7Z4H8 507 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 HSD11B1LQ7Z5J1 315 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 ZNF548Q8NEK5 533 aaPredicted RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 NUS1Q96E22 293 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 C10orf88Q9H8K7 445 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 LZTFL1Q9NQ48 299 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 GOLGA6AQ9NYA3 693 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 NLGN3Q9NZ94 848 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 U3KQA8 63 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 SHROOM3Q8TF72 1996 aa13.94□□□□□ -0.18
CLIP3-205ENST00000592017 COL5A1P20908 1838 aaPredicted RBP13.94□□□□□ -0.18
CLIP3-205ENST00000592017 TRPM6Q9BX84 2022 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 A0A0J9YYE9 177 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 NEMP2A6NFY4 417 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 CAPN8A6NHC0 703 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 MIF4GDA9UHW6 222 aaKnown RBP13.93□□□□□ -0.18
CLIP3-205ENST00000592017 GCATO75600 419 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 TRBC1P01850 177 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 CKMT1AP12532 417 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 GM2AP17900 193 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 PTPN7P35236 360 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 HNF1BP35680 557 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 ETV3P41162 512 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 YPEL5P62699 121 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 CCZ1BP86790 482 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
CLIP3-205ENST00000592017 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
CLIP3-205ENST00000592017 MTM1Q13496 603 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 GALNT3Q14435 633 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 NOMO1Q15155 1222 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 LRRC66Q68CR7 880 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
CLIP3-205ENST00000592017 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms