RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 CELA2BP08218 269 aaPredicted RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 CYP2A6P11509 494 aaPredicted RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 CHRNA4P43681 627 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 RABIFP47224 123 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 WNT3AP56704 352 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 PTSQ03393 145 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 SLC14A1Q13336 389 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 XRCC4Q13426 336 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 USP45Q70EL2 814 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 TECPR1Q7Z6L1 1165 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 SLCO6A1Q86UG4 719 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 CCDC110Q8TBZ0 833 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 RHBDD1Q8TEB9 315 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 SCAMP4Q969E2 229 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 TSACCQ96A04 125 aaPredicted RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 EID2BQ96D98 161 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 DTD2Q96FN9 168 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 AGAP2Q99490 1192 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 APOOQ9BUR5 198 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 MLPHQ9BV36 600 aaPredicted RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 LGR4Q9BXB1 951 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 TLR10Q9BXR5 811 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 TRMT1Q9NXH9 659 aaKnown RBP11.53□□□□□ -0.56
VMP1-211ENST00000591315 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 PCDHGB2Q9Y5G2 931 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 LRP4O75096 1905 aa11.52□□□□□ -0.56
VMP1-211ENST00000591315 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 A0A1W2PQ67 120 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 CFAP69A5D8W1 941 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 TMEM202A6NGA9 273 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 CAPN8A6NHC0 703 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 USP27XA6NNY8 438 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ANKRD66B4E2M5 251 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 TRIM38O00635 465 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ENC1O14682 589 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 AURKAO14965 403 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 FFAR2O15552 330 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 MAGEC1O60732 1142 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 SLC4A1P02730 911 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ITGAVP06756 1048 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 GIMD1P0DJR0 217 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 CEACAM1P13688 526 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 DGKAP23743 735 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 PSMB4P28070 264 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 CXCR5P32302 372 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ARRB1P49407 418 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 STC1P52823 247 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 GDF10P55107 478 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 SIM1P81133 766 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 CDK18Q07002 472 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 C1orf61Q13536 156 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 AGERQ15109 404 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 TRIP6Q15654 476 aaKnown RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 LYSMD3Q7Z3D4 306 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ZSCAN30Q86W11 494 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 CDKL3Q8IVW4 592 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 TAB3Q8N5C8 712 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 PNPLA1Q8N8W4 532 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 FAM71DQ8N9W8 422 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 IPMKQ8NFU5 416 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 SLC35B2Q8TB61 432 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 BAHD1Q8TBE0 780 aaPredicted RBP11.52□□□□□ -0.57
VMP1-211ENST00000591315 C1orf54Q8WWF1 131 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 NUS1Q96E22 293 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 MRGPRX2Q96LB1 330 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 WDR24Q96S15 920 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 C1QTNF7Q9BXJ2 289 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ABCG8Q9H221 673 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 RSPH14Q9UHP6 348 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 PYCARDQ9ULZ3 195 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 SHOC2Q9UQ13 582 aa11.52□□□□□ -0.57
VMP1-211ENST00000591315 ACACBO00763 2458 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 RP1P56715 2156 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 FLRT2O43155 660 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GCATO75600 419 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 PIAS2O75928 621 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 NDST3O95803 873 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SOD1P00441 154 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 NME1P15531 152 aaKnown RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 JUNDP17535 347 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SPINK2P20155 84 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 CETN2P41208 172 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GRK6P43250 576 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 THOP1P52888 689 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms