RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZC3H18Q86VM9 953 aaKnown RBP18.24■□□□□ 0.51
DDX39A-212ENST00000590260 PHACTR4Q8IZ21 702 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 LPCAT1Q8NF37 534 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 TSACCQ96A04 125 aaPredicted RBP18.24■□□□□ 0.51
DDX39A-212ENST00000590260 EID2BQ96D98 161 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 TEKT5Q96M29 485 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 QKIQ96PU8 341 aaKnown RBP eCLIP18.24■□□□□ 0.51
DDX39A-212ENST00000590260 WDR24Q96S15 920 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 ANP32EQ9BTT0 268 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 LRRC61Q9BV99 259 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 GLOD4Q9HC38 313 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 ASPMQ8IZT6 3477 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 WDFY3Q8IZQ1 3526 aa18.24■□□□□ 0.51
DDX39A-212ENST00000590260 COL27A1Q8IZC6 1860 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 CAPN8A6NHC0 703 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 SCAMP1O15126 338 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 FTCDO95954 541 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 MT-CYBP00156 380 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 FUCA1P04066 466 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 CYP2A6P11509 494 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 THOP1P52888 689 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 COPS2P61201 443 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 HNRNPKP61978 463 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 CCZ1BP86790 482 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 CCZ1P86791 482 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 KIF5AQ12840 1032 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 ZNF211Q13398 564 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 C1orf61Q13536 156 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 INAVAQ3KP66 663 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 PTCD2Q8WV60 388 aaKnown RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 TFB1MQ8WVM0 346 aaKnown RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 P3H4Q92791 437 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 GATA6Q92908 595 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 NUS1Q96E22 293 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 LYSMD1Q96S90 227 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 FAM118BQ9BPY3 351 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 SLC25A51Q9H1U9 297 aa18.23■□□□□ 0.51
DDX39A-212ENST00000590260 APOBEC2Q9Y235 224 aaKnown RBP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
DDX39A-212ENST00000590260 APOC4-APOC2K7ER74 178 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 PSMD11O00231 422 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 AQP9O43315 295 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 TRIM16O95361 564 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 CLDN7O95471 211 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 APOC2P02655 101 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 STC1P52823 247 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 RWDD2BP57060 319 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 GSDMDP57764 484 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 KIAA1024LP59773 190 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 PTK2BQ14289 1009 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 GALNT3Q14435 633 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 USP45Q70EL2 814 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 ZNF567Q8N184 647 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 OR1E3Q8WZA6 343 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 PDXPQ96GD0 296 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 AGAP2Q99490 1192 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 ABCG8Q9H221 673 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 FGF22Q9HCT0 170 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 MRPL40Q9NQ50 206 aaKnown RBP18.22■□□□□ 0.51
DDX39A-212ENST00000590260 NLGN3Q9NZ94 848 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 APOBEC3BQ9UH17 382 aaKnown RBP18.22■□□□□ 0.51
DDX39A-212ENST00000590260 CD84Q9UIB8 345 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 EFR3BQ9Y2G0 817 aa18.22■□□□□ 0.51
DDX39A-212ENST00000590260 SCN8AQ9UQD0 1980 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 HOXC4P09017 264 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-212ENST00000590260 NFKB1P19838 968 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 RBL1P28749 1068 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 HK3P52790 923 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
DDX39A-212ENST00000590260 OTUD4Q01804 1114 aaKnown RBP18.21■□□□□ 0.51
DDX39A-212ENST00000590260 KDELC1Q6UW63 502 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 ENPP7Q6UWV6 458 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 DHRS13Q6UX07 377 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 KDELC2Q7Z4H8 507 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 LRRC8AQ8IWT6 810 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 LMX1AQ8TE12 382 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 SCAMP4Q969E2 229 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 OXNAD1Q96HP4 312 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-212ENST00000590260 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 APOLD1Q96LR9 279 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 TEX101Q9BY14 249 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 RPL26L1Q9UNX3 145 aaKnown RBP18.21■□□□□ 0.51
DDX39A-212ENST00000590260 NEUROG3Q9Y4Z2 214 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 CSNK1G3Q9Y6M4 447 aa18.21■□□□□ 0.51
DDX39A-212ENST00000590260 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 C1QTNF9BB2RNN3 333 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 ANKRD66B4E2M5 251 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 F5H423 210 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-212ENST00000590260 C1QTNF9P0C862 333 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 TSHRP16473 764 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 CKMT2P17540 419 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 ACP1P24666 158 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 TCEA2Q15560 299 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 SLC14A2Q15849 920 aa18.2■□□□□ 0.5
DDX39A-212ENST00000590260 DEFB133Q30KQ1 61 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms