RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 SLC6A18Q96N87 628 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 MAK16Q9BXY0 300 aaKnown RBP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 SUV39H2Q9H5I1 410 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 CAPN10Q9HC96 672 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 VPS45Q9NRW7 570 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 PCDHGC4Q9Y5F7 938 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 A0A1W2PQU0 124 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 TSPAN11A1L157 253 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 AREL1O15033 823 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 SLC7A4O43246 635 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 LATO43561 262 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 RNGTTO60942 597 aaKnown RBP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 WNT1P04628 370 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 DSC2Q02487 901 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 NSUN2Q08J23 767 aaKnown RBP eCLIP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 RIPK1Q13546 671 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 ARRDC2Q8TBH0 407 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 RBM41Q96IZ5 413 aaKnown RBP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 LRIG1Q96JA1 1093 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 CCDC77Q9BR77 488 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 OSBPL8Q9BZF1 889 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 PCED1AQ9H1Q7 454 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 FZD3Q9NPG1 666 aa17.66■□□□□ 0.42
DNMT1-215ENST00000588913 RBM22Q9NW64 420 aaKnown RBP eCLIP17.66■□□□□ 0.42
DNMT1-215ENST00000588913 A0A1W2PPC4 97 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 TLDC2A0PJX2 215 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 LRRC72A6NJI9 287 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 LRP3O75074 770 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 JCHAINP01591 159 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 SHBGP04278 402 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 CCNB1P14635 433 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 EZRP15311 586 aaKnown RBP17.65■□□□□ 0.42
DNMT1-215ENST00000588913 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
DNMT1-215ENST00000588913 ZNF284Q2VY69 593 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 WLSQ5T9L3 541 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 ECHDC3Q96DC8 303 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 SNF8Q96H20 258 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 PPP1R16AQ96I34 528 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 NUDCD1Q96RS6 583 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 IL12RB2Q99665 862 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 MYOCQ99972 504 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 OSBPL1AQ9BXW6 950 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 TM9SF3Q9HD45 589 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 DYRK4Q9NR20 520 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 ACTL7BQ9Y614 415 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 SPTBN4Q9H254 2564 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 KNL1Q8NG31 2342 aa17.65■□□□□ 0.42
DNMT1-215ENST00000588913 A0A0U1RQS6 177 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 MGRN1O60291 552 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 CFIP05156 583 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 MMP2P08253 660 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 CD27P26842 260 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 CCR5P51681 352 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 AP1B1Q10567 949 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 TFDP2Q14188 446 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 TMEM259Q4ZIN3 620 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 WDR45BQ5MNZ6 344 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 FBXL19Q6PCT2 694 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 SLC23A3Q6PIS1 610 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 ADAT2Q7Z6V5 191 aaKnown RBP17.64■□□□□ 0.41
DNMT1-215ENST00000588913 LRRC49Q8IUZ0 686 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 FATE1Q969F0 183 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 SEMA3CQ99985 751 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 DKK3Q9UBP4 350 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 SLC12A4Q9UP95 1085 aa17.64■□□□□ 0.41
DNMT1-215ENST00000588913 RAD51BO15315 384 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 MX2P20592 715 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TGM2P21980 687 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 PTPN7P35236 360 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 CSNK1EP49674 416 aaKnown RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 IFI35P80217 286 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 WASHC5Q12768 1159 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 PTK6Q13882 451 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 SYCP2LQ5T4T6 812 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 ALG1LQ6GMV1 187 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TTC27Q6P3X3 843 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TTC7BQ86TV6 843 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 ZC3H18Q86VM9 953 aaKnown RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TRIM69Q86WT6 500 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 RELL1Q8IUW5 271 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 RIBC1Q8N443 379 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TTLL3Q9Y4R7 772 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 CDX4O14627 284 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 BCAT2O15382 392 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 SUN1O94901 812 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 PCDH8O95206 1070 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 PDHA1P08559 390 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 ZFXP17010 805 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 CETN2P41208 172 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 AP1S1P61966 158 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 RAD51Q06609 339 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 SFSWAPQ12872 951 aaKnown RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 SIX1Q15475 284 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-215ENST00000588913 DUOXA1Q1HG43 343 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 TRPM8Q7Z2W7 1104 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 HORMAD1Q86X24 394 aa17.63■□□□□ 0.41
DNMT1-215ENST00000588913 MDM1Q8TC05 714 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms